RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NOC4LQ9BVI4 516 aaKnown RBP14.44□□□□□ -0.1
SCN1B-202ENST00000415950 PLVAPQ9BX97 442 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 GOLPH3LQ9H4A5 285 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 CASP14P31944 242 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 APBB1IPQ7Z5R6 666 aaPredicted RBP14.44□□□□□ -0.1
SCN1B-202ENST00000415950 CCDC77Q9BR77 488 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 PRR36Q9H6K5 1346 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 GOLGA6BA6NDN3 693 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 KSR1Q8IVT5 923 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 SHROOM2Q13796 1616 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 LTKP29376 864 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 NR5A1Q13285 461 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 PICALMQ13492 652 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 JAKMIP2Q96AA8 810 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 ZNF274Q96GC6 653 aaPredicted RBP14.43□□□□□ -0.1
SCN1B-202ENST00000415950 NLRC4Q9NPP4 1024 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 SOWAHDA6NJG2 315 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 VIMP08670 466 aaKnown RBP14.43□□□□□ -0.1
SCN1B-202ENST00000415950 EPHA10Q5JZY3 1008 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 KRT79Q5XKE5 535 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 KCTD16Q68DU8 428 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 KLHL7Q8IXQ5 586 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 IRX2Q9BZI1 471 aaPredicted RBP14.43□□□□□ -0.1
SCN1B-202ENST00000415950 SYNCQ9H7C4 482 aa14.43□□□□□ -0.1
SCN1B-202ENST00000415950 IRX5P78411 483 aaPredicted RBP14.42□□□□□ -0.1
SCN1B-202ENST00000415950 PDE4DQ08499 809 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 DYMQ7RTS9 669 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 ACRBPQ8NEB7 543 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 MRRFQ96E11 262 aaKnown RBP14.42□□□□□ -0.1
SCN1B-202ENST00000415950 LRRC27Q9C0I9 530 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 ADCY9O60503 1353 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 MAGEB6P1A0A0J9YX57 407 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 CALM1P0DP23 149 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 CALM2P0DP24 149 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 CALM3P0DP25 149 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 CYP26C1Q6V0L0 522 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 PLBD2Q8NHP8 589 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 TTF2Q9UNY4 1162 aaKnown RBP14.42□□□□□ -0.1
SCN1B-202ENST00000415950 ZCCHC11Q5TAX3 1644 aaKnown RBP14.42□□□□□ -0.1
SCN1B-202ENST00000415950 PSDA5PKW4 1024 aaPredicted RBP14.42□□□□□ -0.1
SCN1B-202ENST00000415950 GUCY2FP51841 1108 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 TMEM87AQ8NBN3 555 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 PTCH1Q13635 1447 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 CCDC172P0C7W6 258 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 INPP5BP32019 993 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 CCDC50Q8IVM0 306 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 CCDC63Q8NA47 563 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 HAUS7Q99871 368 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 TCHPQ9BT92 498 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 DSCC1Q9BVC3 393 aa14.42□□□□□ -0.1
SCN1B-202ENST00000415950 TRAF5O00463 557 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 PAK1Q13153 545 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 DCAF17Q5H9S7 520 aaPredicted RBP14.41□□□□□ -0.1
SCN1B-202ENST00000415950 DPH6Q7L8W6 267 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 ERMNQ8TAM6 284 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 RTEL1Q9NZ71 1219 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 TBC1D7Q9P0N9 293 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 DEXIO95424 95 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 TYW1BQ6NUM6 668 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 TMTC1Q8IUR5 882 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 SDR42E1Q8WUS8 393 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 OSBP2Q969R2 916 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 RASAL2Q9UJF2 1139 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 NIP7Q9Y221 180 aaKnown RBP eCLIP14.41□□□□□ -0.1
SCN1B-202ENST00000415950 METP08581 1390 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 AP5Z1O43299 807 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 HOXB7P09629 217 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 RBM6P78332 1123 aaKnown RBP14.41□□□□□ -0.1
SCN1B-202ENST00000415950 TTC38Q5R3I4 469 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 C8orf74Q6P047 294 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 NOSTRINQ8IVI9 506 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 BCAS4Q8TDM0 211 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 NELFBQ8WX92 580 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 ATP6V0A2Q9Y487 856 aa14.41□□□□□ -0.1
SCN1B-202ENST00000415950 FAM47AQ5JRC9 791 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 SIRT1Q96EB6 747 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 CARMIL3Q8ND23 1372 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 CCT5P48643 541 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 SLF2Q8IX21 1173 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 DCAF5Q96JK2 942 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 TMEM87BQ96K49 555 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 FAM204AQ9H8W3 233 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 TRPM2O94759 1503 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 WWC3Q9ULE0 1092 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 SAR1BQ9Y6B6 198 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 PLEKHG3A1L390 1219 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 SNAP23O00161 211 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 MAGEA1P43355 309 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 CCDC152Q4G0S7 254 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 PNMA8AQ86V59 439 aaPredicted RBP14.4□□□□□ -0.1
SCN1B-202ENST00000415950 PPANQ9NQ55 473 aaKnown RBP14.4□□□□□ -0.1
SCN1B-202ENST00000415950 SAMD15Q9P1V8 674 aa14.4□□□□□ -0.1
SCN1B-202ENST00000415950 GNAQP50148 359 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 SLC39A14Q15043 492 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
SCN1B-202ENST00000415950 ZNF622Q969S3 477 aaKnown RBP eCLIP14.39□□□□□ -0.11
SCN1B-202ENST00000415950 SLC52A2Q9HAB3 445 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 HLA-DOAP06340 250 aa14.39□□□□□ -0.11
SCN1B-202ENST00000415950 ARL1P40616 181 aaPredicted RBP14.39□□□□□ -0.11
SCN1B-202ENST00000415950 TXKP42681 527 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms