RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 TREML2Q5T2D2 321 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 SIRT2Q8IXJ6 389 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 SLAIN1Q8ND83 568 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 COA7Q96BR5 231 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 CRNKL1Q9BZJ0 848 aaKnown RBP24.76■■□□□ 1.55
PTPRU-203ENST00000415600 EHD4Q9H223 541 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 SERPINB13Q9UIV8 391 aa24.76■■□□□ 1.55
PTPRU-203ENST00000415600 PHIPQ8WWQ0 1821 aa24.75■■□□□ 1.55
PTPRU-203ENST00000415600 TNRC18O15417 2968 aaPredicted RBP24.75■■□□□ 1.55
PTPRU-203ENST00000415600 GOLIM4O00461 696 aa24.75■■□□□ 1.55
PTPRU-203ENST00000415600 EN2P19622 333 aaPredicted RBP24.75■■□□□ 1.55
PTPRU-203ENST00000415600 IRX3P78415 501 aaPredicted RBP24.75■■□□□ 1.55
PTPRU-203ENST00000415600 FAM110CQ1W6H9 321 aa24.75■■□□□ 1.55
PTPRU-203ENST00000415600 NKX2-3Q8TAU0 364 aa24.75■■□□□ 1.55
PTPRU-203ENST00000415600 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.75■■□□□ 1.55
PTPRU-203ENST00000415600 ZBTB21Q9ULJ3 1066 aa24.75■■□□□ 1.55
PTPRU-203ENST00000415600 FOCADQ5VW36 1801 aa24.74■■□□□ 1.55
PTPRU-203ENST00000415600 CTGFP29279 349 aa24.74■■□□□ 1.55
PTPRU-203ENST00000415600 MTMR2Q13614 643 aa24.74■■□□□ 1.55
PTPRU-203ENST00000415600 ANKRD13CQ8N6S4 541 aa24.74■■□□□ 1.55
PTPRU-203ENST00000415600 LRRCC1Q9C099 1032 aa24.74■■□□□ 1.55
PTPRU-203ENST00000415600 MYO5AQ9Y4I1 1855 aaKnown RBP24.73■■□□□ 1.55
PTPRU-203ENST00000415600 ATAD5Q96QE3 1844 aa24.73■■□□□ 1.55
PTPRU-203ENST00000415600 USP17L10C9JJH3 530 aa24.73■■□□□ 1.55
PTPRU-203ENST00000415600 MYCP01106 439 aaPredicted RBP24.73■■□□□ 1.55
PTPRU-203ENST00000415600 PDE6AP16499 860 aa24.73■■□□□ 1.55
PTPRU-203ENST00000415600 PRKCZQ05513 592 aa24.73■■□□□ 1.55
PTPRU-203ENST00000415600 RRP1BQ14684 758 aaKnown RBP24.73■■□□□ 1.55
PTPRU-203ENST00000415600 DNAJC18Q9H819 358 aa24.73■■□□□ 1.55
PTPRU-203ENST00000415600 GDF11O95390 407 aa24.72■■□□□ 1.55
PTPRU-203ENST00000415600 POLR3DP05423 398 aaPredicted RBP24.72■■□□□ 1.55
PTPRU-203ENST00000415600 ASCC2Q9H1I8 757 aaPredicted RBP24.71■■□□□ 1.55
PTPRU-203ENST00000415600 CABP5Q9NP86 173 aa24.71■■□□□ 1.55
PTPRU-203ENST00000415600 PAG1Q9NWQ8 432 aa24.71■■□□□ 1.55
PTPRU-203ENST00000415600 CDK5RAP2Q96SN8 1893 aa24.71■■□□□ 1.55
PTPRU-203ENST00000415600 CENPFP49454 3210 aa24.71■■□□□ 1.55
PTPRU-203ENST00000415600 ATP5JP18859 108 aa24.71■■□□□ 1.55
PTPRU-203ENST00000415600 GTF3C2Q8WUA4 911 aaPredicted RBP24.71■■□□□ 1.55
PTPRU-203ENST00000415600 RIOK1Q9BRS2 568 aaKnown RBP24.71■■□□□ 1.55
PTPRU-203ENST00000415600 TSHZ2Q9NRE2 1034 aa24.71■■□□□ 1.55
PTPRU-203ENST00000415600 TAOK2Q9UL54 1235 aa24.71■■□□□ 1.55
PTPRU-203ENST00000415600 ZSWIM8A7E2V4 1837 aa24.7■■□□□ 1.55
PTPRU-203ENST00000415600 ZNF532Q9HCE3 1301 aa24.7■■□□□ 1.54
PTPRU-203ENST00000415600 HOXA7P31268 230 aaPredicted RBP24.7■■□□□ 1.54
PTPRU-203ENST00000415600 TATDN1Q6P1N9 297 aa24.7■■□□□ 1.54
PTPRU-203ENST00000415600 FEZ1Q99689 392 aa24.7■■□□□ 1.54
PTPRU-203ENST00000415600 LOC285556D6RIA3 1793 aa24.7■■□□□ 1.54
PTPRU-203ENST00000415600 ADCY3O60266 1144 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 GH2P01242 217 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 FLT3LGP49771 235 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 IRF5Q13568 498 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 CERKLQ49MI3 558 aaPredicted RBP24.69■■□□□ 1.54
PTPRU-203ENST00000415600 ZSCAN25Q6NSZ9 544 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 USP17L2Q6R6M4 530 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 PXYLP1Q8TE99 480 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 GCC1Q96CN9 775 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 DDRGK1Q96HY6 314 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 GPATCH3Q96I76 525 aa24.69■■□□□ 1.54
PTPRU-203ENST00000415600 CAPN2P17655 700 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 USP14P54578 494 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 AMOTL1Q8IY63 956 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 HAUS7Q99871 368 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 BOLA2Q9H3K6 86 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 MCM9Q9NXL9 1143 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 SIPA1L1O43166 1804 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 MYH1P12882 1939 aa24.68■■□□□ 1.54
PTPRU-203ENST00000415600 ABCB5Q2M3G0 1257 aa24.67■■□□□ 1.54
PTPRU-203ENST00000415600 CENPQQ7L2Z9 268 aaPredicted RBP24.67■■□□□ 1.54
PTPRU-203ENST00000415600 MGAMO43451 1857 aa24.67■■□□□ 1.54
PTPRU-203ENST00000415600 RAB3GAP1Q15042 981 aa24.67■■□□□ 1.54
PTPRU-203ENST00000415600 RNF208Q9H0X6 261 aa24.67■■□□□ 1.54
PTPRU-203ENST00000415600 GJB1P08034 283 aa24.66■■□□□ 1.54
PTPRU-203ENST00000415600 CCL5P13501 91 aa24.66■■□□□ 1.54
PTPRU-203ENST00000415600 CCAR1Q8IX12 1150 aaKnown RBP24.66■■□□□ 1.54
PTPRU-203ENST00000415600 GABRQQ9UN88 632 aa24.66■■□□□ 1.54
PTPRU-203ENST00000415600 MTFR1Q15390 333 aa24.65■■□□□ 1.54
PTPRU-203ENST00000415600 MORF4L1Q9UBU8 362 aa24.65■■□□□ 1.54
PTPRU-203ENST00000415600 GPRC5AQ8NFJ5 357 aa24.64■■□□□ 1.54
PTPRU-203ENST00000415600 ATP8A2Q9NTI2 1148 aa24.64■■□□□ 1.54
PTPRU-203ENST00000415600 TCRBV5S4A2TA0A5A2 114 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 ADD2P35612 726 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 HERVK_113P62684 666 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 JAG1P78504 1218 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 SWAP70Q9UH65 585 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 GJA8P48165 433 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 PLCD1P51178 756 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 UBE3CQ15386 1083 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 LCORLQ8N3X6 602 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 P2RX7Q99572 595 aaKnown RBP24.63■■□□□ 1.53
PTPRU-203ENST00000415600 DCP1AQ9NPI6 582 aaPredicted RBP24.63■■□□□ 1.53
PTPRU-203ENST00000415600 ECHDC1Q9NTX5 307 aa24.63■■□□□ 1.53
PTPRU-203ENST00000415600 C12orf42Q96LP6 360 aa24.62■■□□□ 1.53
PTPRU-203ENST00000415600 KIAA1683Q9H0B3 1180 aa24.62■■□□□ 1.53
PTPRU-203ENST00000415600 EMILIN3Q9NT22 766 aa24.62■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L15C9J2P7 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L13C9JLJ4 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L11C9JVI0 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L18D6R9N7 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L22D6RA61 530 aa24.61■■□□□ 1.53
PTPRU-203ENST00000415600 USP17L17D6RBQ6 530 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms