RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 MSL3Q8N5Y2 521 aaKnown RBP23.23■■□□□ 1.31
AP1S3-205ENST00000415298 MAF1Q9H063 256 aa23.23■■□□□ 1.31
AP1S3-205ENST00000415298 UTRNP46939 3433 aa23.23■■□□□ 1.31
AP1S3-205ENST00000415298 IL15P40933 162 aaPredicted RBP23.23■■□□□ 1.31
AP1S3-205ENST00000415298 CCDC8Q9H0W5 538 aaPredicted RBP23.23■■□□□ 1.31
AP1S3-205ENST00000415298 SPEF2Q9C093 1822 aa23.23■■□□□ 1.31
AP1S3-205ENST00000415298 RTL9Q8NET4 1388 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 ARMC3Q5W041 872 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 DDX46Q7L014 1031 aaKnown RBP23.22■■□□□ 1.31
AP1S3-205ENST00000415298 PLEKHM2Q8IWE5 1019 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 GOPCQ9HD26 462 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 WTIPA6NIX2 430 aaPredicted RBP23.22■■□□□ 1.31
AP1S3-205ENST00000415298 MAP2K7O14733 419 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 CIAO1O76071 339 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 NCAPG2Q86XI2 1143 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 MTFR1LQ9H019 292 aa23.22■■□□□ 1.31
AP1S3-205ENST00000415298 TLR7Q9NYK1 1049 aaKnown RBP23.22■■□□□ 1.31
AP1S3-205ENST00000415298 KLRG2A4D1S0 409 aaPredicted RBP23.21■■□□□ 1.31
AP1S3-205ENST00000415298 TAF5LO75529 589 aa23.21■■□□□ 1.31
AP1S3-205ENST00000415298 IGHMBP2P38935 993 aaKnown RBP23.21■■□□□ 1.31
AP1S3-205ENST00000415298 TIMM10P62072 90 aa23.21■■□□□ 1.31
AP1S3-205ENST00000415298 RPS8P62241 208 aaKnown RBP23.21■■□□□ 1.31
AP1S3-205ENST00000415298 RPGRQ92834 1020 aaKnown RBP23.21■■□□□ 1.31
AP1S3-205ENST00000415298 CDC5LQ99459 802 aaKnown RBP23.21■■□□□ 1.31
AP1S3-205ENST00000415298 AACSQ86V21 672 aa23.21■■□□□ 1.31
AP1S3-205ENST00000415298 CLASRPQ8N2M8 674 aaKnown RBP23.21■■□□□ 1.31
AP1S3-205ENST00000415298 GPR161Q8N6U8 529 aaKnown RBP23.21■■□□□ 1.31
AP1S3-205ENST00000415298 CDKL5O76039 1030 aa23.2■■□□□ 1.3
AP1S3-205ENST00000415298 IMPDH2P12268 514 aa23.2■■□□□ 1.3
AP1S3-205ENST00000415298 APOBRQ0VD83 1088 aa23.2■■□□□ 1.3
AP1S3-205ENST00000415298 SNX1Q13596 522 aa23.2■■□□□ 1.3
AP1S3-205ENST00000415298 CHRNA5P30532 468 aa23.2■■□□□ 1.3
AP1S3-205ENST00000415298 CLNS1AP54105 237 aaKnown RBP23.2■■□□□ 1.3
AP1S3-205ENST00000415298 METTL24Q5JXM2 366 aa23.2■■□□□ 1.3
AP1S3-205ENST00000415298 LUZP1Q86V48 1076 aa23.2■■□□□ 1.3
AP1S3-205ENST00000415298 RAB27AP51159 221 aa23.19■■□□□ 1.3
AP1S3-205ENST00000415298 MMTAG2Q9BU76 263 aaKnown RBP23.19■■□□□ 1.3
AP1S3-205ENST00000415298 ACBD3Q9H3P7 528 aa23.19■■□□□ 1.3
AP1S3-205ENST00000415298 CEP126Q9P2H0 1117 aa23.19■■□□□ 1.3
AP1S3-205ENST00000415298 SRGNP10124 158 aa23.19■■□□□ 1.3
AP1S3-205ENST00000415298 FOXD4L6Q3SYB3 417 aaPredicted RBP23.19■■□□□ 1.3
AP1S3-205ENST00000415298 TNNI3KQ59H18 835 aa23.19■■□□□ 1.3
AP1S3-205ENST00000415298 FOXD4L3Q6VB84 417 aaPredicted RBP23.19■■□□□ 1.3
AP1S3-205ENST00000415298 FPGT-TNNI3KV9GXZ4 949 aa23.19■■□□□ 1.3
AP1S3-205ENST00000415298 PDIA5Q14554 519 aa23.18■■□□□ 1.3
AP1S3-205ENST00000415298 BLOC1S6Q9UL45 172 aa23.18■■□□□ 1.3
AP1S3-205ENST00000415298 RIC1Q4ADV7 1423 aa23.18■■□□□ 1.3
AP1S3-205ENST00000415298 VGLL2Q8N8G2 317 aa23.18■■□□□ 1.3
AP1S3-205ENST00000415298 SALL3Q9BXA9 1300 aa23.18■■□□□ 1.3
AP1S3-205ENST00000415298 WDR33Q9C0J8 1336 aaKnown RBP23.18■■□□□ 1.3
AP1S3-205ENST00000415298 PLEKHA4Q9H4M7 779 aa23.18■■□□□ 1.3
AP1S3-205ENST00000415298 KCNA4P22459 653 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 PDE6BP35913 854 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 C3orf20Q8ND61 904 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 NEUROD6Q96NK8 337 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 CD248Q9HCU0 757 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 CHRNDQ07001 517 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 GRAPQ13588 217 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 HHATQ5VTY9 493 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 GRAPLQ8TC17 118 aaPredicted RBP23.17■■□□□ 1.3
AP1S3-205ENST00000415298 BICD2Q8TD16 824 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 ZBTB10Q96DT7 871 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
AP1S3-205ENST00000415298 MINPP1Q9UNW1 487 aa23.17■■□□□ 1.3
AP1S3-205ENST00000415298 TCHHQ07283 1943 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 PDE1AP54750 535 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 NAP1L1P55209 391 aaKnown RBP23.16■■□□□ 1.3
AP1S3-205ENST00000415298 CCZ1BP86790 482 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 CCZ1P86791 482 aaPredicted RBP23.16■■□□□ 1.3
AP1S3-205ENST00000415298 CUL4AQ13619 759 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 LONRF2Q1L5Z9 754 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 ZNF396Q96N95 335 aaPredicted RBP23.16■■□□□ 1.3
AP1S3-205ENST00000415298 PDE11AQ9HCR9 933 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 LMCD1Q9NZU5 365 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 IFIT2P09913 472 aaKnown RBP23.16■■□□□ 1.3
AP1S3-205ENST00000415298 EVCP57679 992 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 CNNM3Q8NE01 707 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 DBNLQ9UJU6 430 aaKnown RBP23.16■■□□□ 1.3
AP1S3-205ENST00000415298 FAN1Q9Y2M0 1017 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 FAM169AQ9Y6X4 670 aa23.16■■□□□ 1.3
AP1S3-205ENST00000415298 PDE8BO95263 885 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 HOXA10P31260 410 aaPredicted RBP23.15■■□□□ 1.3
AP1S3-205ENST00000415298 INPP5BP32019 993 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 C2CD5Q86YS7 1000 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 RBM17Q96I25 401 aaKnown RBP23.15■■□□□ 1.3
AP1S3-205ENST00000415298 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 DBNDD2Q9BQY9 259 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 RPAP1Q9BWH6 1393 aaPredicted RBP23.15■■□□□ 1.3
AP1S3-205ENST00000415298 PYGLP06737 847 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 OLFM4Q6UX06 510 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 KIAA1328Q86T90 577 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 RBM12BQ8IXT5 1001 aaKnown RBP23.15■■□□□ 1.3
AP1S3-205ENST00000415298 ACRBPQ8NEB7 543 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 TDRD7Q8NHU6 1098 aaKnown RBP23.15■■□□□ 1.3
AP1S3-205ENST00000415298 IRX2Q9BZI1 471 aaPredicted RBP23.15■■□□□ 1.3
AP1S3-205ENST00000415298 HOMER3Q9NSC5 361 aa23.15■■□□□ 1.3
AP1S3-205ENST00000415298 PTGER2P43116 358 aa23.14■■□□□ 1.3
AP1S3-205ENST00000415298 MCM2P49736 904 aa23.14■■□□□ 1.3
AP1S3-205ENST00000415298 GORABQ5T7V8 394 aa23.14■■□□□ 1.3
AP1S3-205ENST00000415298 SAAL1Q96ER3 474 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms