RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 EMILIN3Q9NT22 766 aa15.2■□□□□ 0.02
NCKIPSD-203ENST00000415281 MORF4L1Q9UBU8 362 aa15.2■□□□□ 0.02
NCKIPSD-203ENST00000415281 TNPO2O14787 897 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 SGPL1O95470 568 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 INHAP05111 366 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 TRIM32Q13049 653 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 MTMR2Q13614 643 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 Q3C1V9 767 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 MAGEB6Q8N7X4 407 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 SMCR8Q8TEV9 937 aaPredicted RBP15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 TBC1D2Q9BYX2 928 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 PAK6Q9NQU5 681 aaPredicted RBP15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 ZBTB40Q9NUA8 1239 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 RBPJLQ9UBG7 517 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 ZBTB21Q9ULJ3 1066 aa15.19■□□□□ 0.02
NCKIPSD-203ENST00000415281 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 ASNSP08243 561 aa15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 PLCG2P16885 1265 aa15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 FXR1P51114 621 aaKnown RBP eCLIP15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 PLCD1P51178 756 aa15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 SLFNL1Q499Z3 407 aa15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 AACSQ86V21 672 aa15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 CRISPLD2Q9H0B8 497 aa15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 PRO3102Q9H379 93 aa15.18■□□□□ 0.02
NCKIPSD-203ENST00000415281 TCRBV5S4A2TA0A5A2 114 aa15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 GUCY1A2P33402 732 aa15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 GCLCP48506 637 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 GCC1Q96CN9 775 aa15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 NOL10Q9BSC4 688 aaKnown RBP15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 PCDH10Q9P2E7 1040 aa15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
NCKIPSD-203ENST00000415281 RLFQ13129 1914 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 SMIM22K7EJ46 135 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 CNMDO75829 334 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 CHGBP05060 677 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 SHMT1P34896 483 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 UBXN2AP68543 259 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 USP6NLQ92738 828 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 AS3MTQ9HBK9 375 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 BIN2Q9UBW5 565 aaPredicted RBP15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 PNMA3Q9UL41 463 aa15.16■□□□□ 0.02
NCKIPSD-203ENST00000415281 NAV1Q8NEY1 1877 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 C19orf81C9J6K1 198 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 USP17L10C9JJH3 530 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 GH2P01242 217 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 HERVK_113P62684 666 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 GABPAQ06546 454 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 C20orf194Q5TEA3 1177 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 RPAP2Q8IXW5 612 aaPredicted RBP15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 NKX2-3Q8TAU0 364 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 DEFB118Q96PH6 123 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 EHD4Q9H223 541 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 GINM1Q9NU53 330 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 RCAN3Q9UKA8 241 aa15.15■□□□□ 0.02
NCKIPSD-203ENST00000415281 ERC1Q8IUD2 1116 aa15.14■□□□□ 0.01
NCKIPSD-203ENST00000415281 CRACR2BQ8N4Y2 399 aaPredicted RBP15.14■□□□□ 0.01
NCKIPSD-203ENST00000415281 TRIB2Q92519 343 aa15.14■□□□□ 0.01
NCKIPSD-203ENST00000415281 COA7Q96BR5 231 aa15.14■□□□□ 0.01
NCKIPSD-203ENST00000415281 C12orf42Q96LP6 360 aa15.14■□□□□ 0.01
NCKIPSD-203ENST00000415281 PORCNQ9H237 461 aa15.14■□□□□ 0.01
NCKIPSD-203ENST00000415281 LAMA3Q16787 3333 aa15.14■□□□□ 0.01
NCKIPSD-203ENST00000415281 DNAH12Q6ZR08 3092 aa15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 PDE6AP16499 860 aa15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 MAP3K12Q12852 859 aa15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 PABPC4Q13310 644 aaKnown RBP eCLIP15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 MAP3K21Q5TCX8 1036 aa15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 SIAH1Q8IUQ4 282 aa15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 DIS3LQ8TF46 1054 aaKnown RBP15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
NCKIPSD-203ENST00000415281 A0A1W2PRG0 241 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 APBB1O00213 710 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 CYP2D6P10635 497 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 USP5P45974 858 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 KIAA1755Q5JYT7 1200 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 LCORLQ8N3X6 602 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 DPF3Q92784 378 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 KIF1BPQ96EK5 621 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 TMOD4Q9NZQ9 345 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 RBM27Q9P2N5 1060 aaKnown RBP15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 TRIOBPQ9H2D6 2365 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 ZNF532Q9HCE3 1301 aa15.12■□□□□ 0.01
NCKIPSD-203ENST00000415281 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 GOLIM4O00461 696 aa15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 PRKAB2O43741 272 aa15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 FARP2O94887 1054 aaPredicted RBP15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 HLA-DOAP06340 250 aa15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 ERVK-9P63128 1117 aa15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 ERVK-24P63145 666 aa15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 MORN1Q5T089 497 aa15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 TMED8Q6PL24 325 aaPredicted RBP15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 USP17L2Q6R6M4 530 aa15.11■□□□□ 0.01
NCKIPSD-203ENST00000415281 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms