RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 GJD3Q8N144 294 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 TTLL6Q8N841 843 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 ZNF526Q8TF50 670 aaPredicted RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 ZSCAN10Q96SZ4 725 aaPredicted RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 UTP14AQ9BVJ6 771 aaKnown RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 KLF16Q9BXK1 252 aaPredicted RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 NYXQ9GZU5 481 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 ZNF395Q9H8N7 513 aaPredicted RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 TRMT112Q9UI30 125 aaKnown RBP6.21□□□□□ -1.42
VPS41-205ENST00000414632 MAP3K2Q9Y2U5 619 aa6.21□□□□□ -1.42
VPS41-205ENST00000414632 IBTKQ9P2D0 1353 aaPredicted RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 PI4KAP2A4QPH2 592 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 F6X3S4 739 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 SORBS3O60504 671 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 ZIC2O95409 532 aaPredicted RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 DDX58O95786 925 aaKnown RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 PDGFAP04085 211 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 SRGNP10124 158 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 ERCC5P28715 1186 aaPredicted RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 DAB2P98082 770 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 HDLBPQ00341 1268 aaKnown RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 PSMD2Q13200 908 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 ENOX2Q16206 610 aaKnown RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 CWF19L2Q2TBE0 894 aaKnown RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 PARP10Q53GL7 1025 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 C1orf53Q5VUE5 145 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 PRPF40BQ6NWY9 871 aaKnown RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 TMC4Q7Z404 712 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 PI4KAP1Q8N8J0 262 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 TMEM87AQ8NBN3 555 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 SNIP1Q8TAD8 396 aaKnown RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 RPGRQ92834 1020 aaKnown RBP6.2□□□□□ -1.42
VPS41-205ENST00000414632 FAM89AQ96GI7 184 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 MASTLQ96GX5 879 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 ISCA1Q9BUE6 129 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 ZFAND3Q9H8U3 227 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 PKD2L1Q9P0L9 805 aa6.2□□□□□ -1.42
VPS41-205ENST00000414632 LRRC37AA6NMS7 1700 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 A0A1B0GUL6 1792 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 PNMA6FA0A0J9YX94 578 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 IGKV5-2P06315 115 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 NPR1P16066 1061 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 PRELPP51888 382 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 WDR4P57081 412 aaKnown RBP6.19□□□□□ -1.42
VPS41-205ENST00000414632 NAALADL2Q58DX5 795 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 ZNF697Q5TEC3 545 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 ALG1LQ6GMV1 187 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 STYK1Q6J9G0 422 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 KSR2Q6VAB6 950 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 TREML1Q86YW5 311 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 GPR152Q8TDT2 470 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 DRC1Q96MC2 740 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 METTL22Q9BUU2 404 aaPredicted RBP6.19□□□□□ -1.42
VPS41-205ENST00000414632 SH3TC1Q8TE82 1336 aa6.19□□□□□ -1.42
VPS41-205ENST00000414632 RIC1Q4ADV7 1423 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 KLRG2A4D1S0 409 aaPredicted RBP6.18□□□□□ -1.42
VPS41-205ENST00000414632 J3QL48 77 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 NFKBIEO00221 500 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 IRS4O14654 1257 aaPredicted RBP6.18□□□□□ -1.42
VPS41-205ENST00000414632 PCSK2P16519 638 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 TXLNAP40222 546 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 GNASQ5JWF2 1037 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 SLC4A10Q6U841 1118 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 ZNF598Q86UK7 904 aaKnown RBP6.18□□□□□ -1.42
VPS41-205ENST00000414632 TTC16Q8NEE8 873 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 RHBDD1Q8TEB9 315 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 SREK1Q8WXA9 508 aaKnown RBP6.18□□□□□ -1.42
VPS41-205ENST00000414632 SSH1Q8WYL5 1049 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 CWC25Q9NXE8 425 aaPredicted RBP6.18□□□□□ -1.42
VPS41-205ENST00000414632 RNF181Q9P0P0 153 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 VTI1BQ9UEU0 232 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 ABCC4O15439 1325 aa6.18□□□□□ -1.42
VPS41-205ENST00000414632 TTC24A2A3L6 582 aaPredicted RBP6.17□□□□□ -1.42
VPS41-205ENST00000414632 NEURL1BA8MQ27 555 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 TIMP2P16035 220 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 NEXNQ0ZGT2 675 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 C8orf34Q49A92 452 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 CRY2Q49AN0 593 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 SLC10A5Q5PT55 438 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 UBE3BQ7Z3V4 1068 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 TRMT2AQ8IZ69 625 aaKnown RBP6.17□□□□□ -1.42
VPS41-205ENST00000414632 DNAAF4Q8WXU2 420 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 RBM17Q96I25 401 aaKnown RBP6.17□□□□□ -1.42
VPS41-205ENST00000414632 CSRNP1Q96S65 589 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 CHMP4AQ9BY43 222 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 GRIP2Q9C0E4 1043 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 SMC4Q9NTJ3 1288 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 PDZRN3Q9UPQ7 1066 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 COL4A5P29400 1685 aa6.17□□□□□ -1.42
VPS41-205ENST00000414632 LTBP1Q14766 1721 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 DUOX1Q9NRD9 1551 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 EIF1AYO14602 144 aaKnown RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 MICAL2O94851 1124 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 PCCAP05165 728 aaPredicted RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 GNA15P30679 374 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 HOXA10P31260 410 aaPredicted RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 TRIM28Q13263 835 aaKnown RBP6.16□□□□□ -1.42
VPS41-205ENST00000414632 ORC1Q13415 861 aa6.16□□□□□ -1.42
VPS41-205ENST00000414632 CCDC93Q567U6 631 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms