RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 HMGB1P09429 215 aaKnown RBP18.14■□□□□ 0.5
LINC00116-201ENST00000414416 CASTP20810 708 aaKnown RBP18.14■□□□□ 0.5
LINC00116-201ENST00000414416 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.5
LINC00116-201ENST00000414416 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.5
LINC00116-201ENST00000414416 MYH8P13535 1937 aa18.14■□□□□ 0.49
LINC00116-201ENST00000414416 NT5C2P49902 561 aa18.14■□□□□ 0.49
LINC00116-201ENST00000414416 SNX21Q969T3 373 aa18.14■□□□□ 0.49
LINC00116-201ENST00000414416 ZNF341Q9BYN7 854 aa18.14■□□□□ 0.49
LINC00116-201ENST00000414416 TM6SF1Q9BZW5 370 aa18.14■□□□□ 0.49
LINC00116-201ENST00000414416 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 PPP1R12BO60237 982 aaPredicted RBP18.13■□□□□ 0.49
LINC00116-201ENST00000414416 FAM47AQ5JRC9 791 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 BLOC1S2Q6QNY1 142 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 CCDC17Q96LX7 622 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 ITGBL1O95965 494 aaPredicted RBP18.13■□□□□ 0.49
LINC00116-201ENST00000414416 TSPY3P0CV98 308 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 TSPY8P0CW00 308 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 TFAP4Q01664 338 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 PRKG1Q13976 671 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 RABEP1Q15276 862 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 MB21D2Q8IYB1 491 aaPredicted RBP18.13■□□□□ 0.49
LINC00116-201ENST00000414416 NKX2-3Q8TAU0 364 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 ZNF408Q9H9D4 720 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 ZSWIM6Q9HCJ5 1215 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 ZSWIM5Q9P217 1185 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 FZD1Q9UP38 647 aa18.13■□□□□ 0.49
LINC00116-201ENST00000414416 PHF20L1A8MW92 1017 aa18.12■□□□□ 0.49
LINC00116-201ENST00000414416 TOMM70O94826 608 aa18.12■□□□□ 0.49
LINC00116-201ENST00000414416 MCM5P33992 734 aa18.12■□□□□ 0.49
LINC00116-201ENST00000414416 FMR1Q06787 632 aaKnown RBP eCLIP18.12■□□□□ 0.49
LINC00116-201ENST00000414416 COL9A3Q14050 684 aaPredicted RBP18.12■□□□□ 0.49
LINC00116-201ENST00000414416 HSCBQ8IWL3 235 aa18.12■□□□□ 0.49
LINC00116-201ENST00000414416 SMC1BQ8NDV3 1235 aa18.12■□□□□ 0.49
LINC00116-201ENST00000414416 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
LINC00116-201ENST00000414416 CYP46A1Q9Y6A2 500 aa18.12■□□□□ 0.49
LINC00116-201ENST00000414416 CPA1P15085 419 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 AKR1B1P15121 316 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 RUFY3Q7L099 469 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 DHX32Q7L7V1 743 aaKnown RBP18.11■□□□□ 0.49
LINC00116-201ENST00000414416 MPHOSPH10O00566 681 aaKnown RBP18.11■□□□□ 0.49
LINC00116-201ENST00000414416 GDF11O95390 407 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 RPS6KB1P23443 525 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 RRP1BQ14684 758 aaKnown RBP18.11■□□□□ 0.49
LINC00116-201ENST00000414416 ABCB5Q2M3G0 1257 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 CHST3Q7LGC8 479 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 RBM46Q8TBY0 533 aaKnown RBP18.11■□□□□ 0.49
LINC00116-201ENST00000414416 KLRG1Q96E93 195 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 WRNIP1Q96S55 665 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 ZNF112Q9UJU3 913 aa18.11■□□□□ 0.49
LINC00116-201ENST00000414416 USP2O75604 605 aaPredicted RBP18.1■□□□□ 0.49
LINC00116-201ENST00000414416 CAP2P40123 477 aa18.1■□□□□ 0.49
LINC00116-201ENST00000414416 TTLL12Q14166 644 aaPredicted RBP18.1■□□□□ 0.49
LINC00116-201ENST00000414416 IQCA1Q86XH1 822 aa18.1■□□□□ 0.49
LINC00116-201ENST00000414416 CABP5Q9NP86 173 aa18.1■□□□□ 0.49
LINC00116-201ENST00000414416 PRC1O43663 620 aa18.1■□□□□ 0.49
LINC00116-201ENST00000414416 CTNND1O60716 968 aaKnown RBP18.1■□□□□ 0.49
LINC00116-201ENST00000414416 IREB2P48200 963 aaKnown RBP18.1■□□□□ 0.49
LINC00116-201ENST00000414416 NEDD1Q8NHV4 660 aa18.1■□□□□ 0.49
LINC00116-201ENST00000414416 SLKQ9H2G2 1235 aaPredicted RBP18.1■□□□□ 0.49
LINC00116-201ENST00000414416 ANGEL1Q9UNK9 670 aaKnown RBP18.1■□□□□ 0.49
LINC00116-201ENST00000414416 PLIN4Q96Q06 1357 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 CELF2O95319 508 aaKnown RBP18.09■□□□□ 0.49
LINC00116-201ENST00000414416 GH2P01242 217 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 NEK4P51957 841 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 ANTXR2P58335 489 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 EXOSC10Q01780 885 aaKnown RBP18.09■□□□□ 0.49
LINC00116-201ENST00000414416 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.09■□□□□ 0.498e-8■□□□□ 9.6
LINC00116-201ENST00000414416 TCEANC2Q96MN5 208 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 ZKSCAN3Q9BRR0 538 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 UBAC1Q9BSL1 405 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 WDR19Q8NEZ3 1342 aa18.09■□□□□ 0.49
LINC00116-201ENST00000414416 INPP5BP32019 993 aa18.08■□□□□ 0.49
LINC00116-201ENST00000414416 SART3Q15020 963 aaKnown RBP18.08■□□□□ 0.49
LINC00116-201ENST00000414416 SHROOM1Q2M3G4 852 aaPredicted RBP18.08■□□□□ 0.49
LINC00116-201ENST00000414416 TMEM179Q6ZVK1 233 aa18.08■□□□□ 0.49
LINC00116-201ENST00000414416 ARMC9Q7Z3E5 817 aa18.08■□□□□ 0.49
LINC00116-201ENST00000414416 JAG1P78504 1218 aa18.08■□□□□ 0.48
LINC00116-201ENST00000414416 MAP3K11Q16584 847 aa18.08■□□□□ 0.48
LINC00116-201ENST00000414416 ZKSCAN4Q969J2 545 aaPredicted RBP18.08■□□□□ 0.48
LINC00116-201ENST00000414416 ZSCAN10Q96SZ4 725 aaPredicted RBP18.08■□□□□ 0.48
LINC00116-201ENST00000414416 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.08■□□□□ 0.48
LINC00116-201ENST00000414416 LRRC2Q9BYS8 371 aa18.08■□□□□ 0.48
LINC00116-201ENST00000414416 PDRG1Q9NUG6 133 aa18.08■□□□□ 0.48
LINC00116-201ENST00000414416 TCP11L1Q9NUJ3 509 aa18.08■□□□□ 0.48
LINC00116-201ENST00000414416 ZBTB21Q9ULJ3 1066 aa18.08■□□□□ 0.48
LINC00116-201ENST00000414416 ERICH2A1L162 156 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 IFIT3O14879 490 aaKnown RBP18.07■□□□□ 0.48
LINC00116-201ENST00000414416 NMT2O60551 498 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 ASNSP08243 561 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 MAP3K9P80192 1104 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 FGD1P98174 961 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 RAB3GAP1Q15042 981 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 MOB2Q70IA6 237 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 GBA2Q9HCG7 927 aaPredicted RBP18.07■□□□□ 0.48
LINC00116-201ENST00000414416 IL17RBQ9NRM6 502 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 GINM1Q9NU53 330 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.07■□□□□ 0.48
LINC00116-201ENST00000414416 FKBP1BP68106 108 aa18.07■□□□□ 0.48
LINC00116-201ENST00000414416 SEPT2Q15019 361 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms