RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 ZNF112Q9UJU3 913 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
HLA-DMB-257ENST00000414017 LAMB1P07942 1786 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 RASSF10A6NK89 507 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 RANBP6O60518 1105 aaKnown RBP12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 GH2P01242 217 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 AKR1B1P15121 316 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 KCNA4P22459 653 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 CAP2P40123 477 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 ATP2B2Q01814 1243 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 MAP3K10Q02779 954 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 GABPAQ06546 454 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 RASAL3Q86YV0 1011 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 OPTNQ96CV9 577 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 CAPNS2Q96L46 248 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZNF287Q9HBT7 754 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
HLA-DMB-257ENST00000414017 AOC2O75106 756 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 DSG3P32926 999 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 ECE1P42892 770 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 VEGFBP49765 207 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 JAG1P78504 1218 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 FAM47AQ5JRC9 791 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 TATDN1Q6P1N9 297 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 MFSD6Q6ZSS7 791 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 METTL16Q86W50 562 aaKnown RBP12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 WNK4Q96J92 1243 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZBTB21Q9ULJ3 1066 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZHX2Q9Y6X8 837 aa12.38□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZMYM6O95789 1325 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 TSPY2A6NKD2 308 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 REC8O95072 547 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 ASNSP08243 561 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 SLC10A3P09131 477 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 TSPY3P0CV98 308 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 TSPY8P0CW00 308 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 PTPRAP18433 802 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 RASA1P20936 1047 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 SEPT2Q15019 361 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 NOL9Q5SY16 702 aaKnown RBP12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 AKNAD1Q5T1N1 836 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 ERO1BQ86YB8 467 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 CLEC10AQ8IUN9 316 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 MAP4K1Q92918 833 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 CCDC102AQ96A19 550 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 ANAPC4Q9UJX5 808 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 ROBO3Q96MS0 1386 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 NEDD4P46934 1319 aa12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 WDR33Q9C0J8 1336 aaKnown RBP12.37□□□□□ -0.43
HLA-DMB-257ENST00000414017 SPDYE5A6NIY4 337 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 RAD21O60216 631 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 CYP21A2P08686 494 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 GJA5P36382 358 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 TFAP4Q01664 338 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 HHIPL1Q96JK4 782 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 RNF41Q9H4P4 317 aaPredicted RBP12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 AS3MTQ9HBK9 375 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 MYH8P13535 1937 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 DOCK1Q14185 1865 aa12.36□□□□□ -0.43
HLA-DMB-257ENST00000414017 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 FAM155AB1AL88 458 aaPredicted RBP12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 B4E1Z4 1266 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 IRF6O14896 467 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 SLC27A2O14975 620 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 KIF23Q02241 960 aaPredicted RBP12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 PPATQ06203 517 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 TRDNQ13061 729 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 SPP2Q13103 211 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 PPIL2Q13356 520 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 RNF20Q5VTR2 975 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 STAG1Q8WVM7 1258 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 CCDC17Q96LX7 622 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZIC5Q96T25 663 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 FEZ1Q99689 392 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 TAF6LQ9Y6J9 622 aa12.35□□□□□ -0.43
HLA-DMB-257ENST00000414017 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 E7EWF7 191 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 ICA1Q05084 483 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 NOGQ13253 232 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 ESR2Q92731 530 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 CHMP4CQ96CF2 233 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 ZKSCAN3Q9BRR0 538 aa12.34□□□□□ -0.43
HLA-DMB-257ENST00000414017 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 ORC4O43929 436 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 NMT2O60551 498 aa12.33□□□□□ -0.44
HLA-DMB-257ENST00000414017 KDM4AO75164 1064 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms