RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ENOX1Q8TC92 643 aaKnown RBP17.14■□□□□ 0.33
TTC39A-208ENST00000413473 CSRNP2Q9H175 543 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 PHLPP2Q6ZVD8 1323 aa17.14■□□□□ 0.33
TTC39A-208ENST00000413473 ZNF18P17022 549 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 CHRNDQ07001 517 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 FANCGO15287 622 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 ARHGAP6O43182 974 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 TBX2Q13207 712 aaPredicted RBP17.13■□□□□ 0.33
TTC39A-208ENST00000413473 MED15Q96RN5 788 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 DACH1Q9UI36 760 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 TNKSO95271 1327 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
TTC39A-208ENST00000413473 ZSCAN12O43309 604 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 ACTN4O43707 911 aaKnown RBP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 FAM205CA6NFA0 338 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 RCAN1P53805 252 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 SEC23AQ15436 765 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 KRT222Q8N1A0 295 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 BAG1Q99933 345 aaPredicted RBP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 SAMSN1Q9NSI8 373 aaKnown RBP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 ZNF446Q9NWS9 450 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 PPP2R2CQ9Y2T4 447 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 URI1O94763 535 aaPredicted RBP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 ADKP55263 362 aaKnown RBP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 SPECC1LQ69YQ0 1117 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 FAM177A1Q8N128 213 aaPredicted RBP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 ESR2Q92731 530 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 RAI14Q9P0K7 980 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 VPS54Q9P1Q0 977 aa17.12■□□□□ 0.33
TTC39A-208ENST00000413473 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
TTC39A-208ENST00000413473 H2AFXP16104 143 aaPredicted RBP17.11■□□□□ 0.33
TTC39A-208ENST00000413473 TC2NQ8N9U0 490 aa17.11■□□□□ 0.33
TTC39A-208ENST00000413473 TRIML1Q8N9V2 468 aa17.11■□□□□ 0.33
TTC39A-208ENST00000413473 RNF26Q9BY78 433 aaPredicted RBP17.11■□□□□ 0.33
TTC39A-208ENST00000413473 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
TTC39A-208ENST00000413473 VWA3AA6NCI4 1184 aa17.11■□□□□ 0.33
TTC39A-208ENST00000413473 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
TTC39A-208ENST00000413473 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
TTC39A-208ENST00000413473 ARHGAP29Q52LW3 1261 aa17.11■□□□□ 0.33
TTC39A-208ENST00000413473 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
TTC39A-208ENST00000413473 WTIPA6NIX2 430 aaPredicted RBP17.1■□□□□ 0.33
TTC39A-208ENST00000413473 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 CAMTA2O94983 1202 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 PKN1Q16512 942 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
TTC39A-208ENST00000413473 NUTM2AQ8IVF1 878 aaPredicted RBP17.1■□□□□ 0.33
TTC39A-208ENST00000413473 SPATA20Q8TB22 786 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 DHX58Q96C10 678 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 EPSTI1Q96J88 318 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 FAM53CQ9NYF3 392 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 PRDM1O75626 825 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 GYG1P46976 350 aa17.1■□□□□ 0.33
TTC39A-208ENST00000413473 ENAHQ8N8S7 591 aaPredicted RBP17.1■□□□□ 0.33
TTC39A-208ENST00000413473 V9GY48 417 aaPredicted RBP17.1■□□□□ 0.33
TTC39A-208ENST00000413473 MYH6P13533 1939 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 BCORQ6W2J9 1755 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 CYP2D7A0A087X1C5 515 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 STX10O60499 249 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 NTSR2O95665 410 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 XBP1P17861 261 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 GABPB1Q06547 395 aaPredicted RBP17.09■□□□□ 0.33
TTC39A-208ENST00000413473 UBXN4Q92575 508 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 ANAPC4Q9UJX5 808 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 A0A087X0B3 334 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 AFMP43652 599 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 PLCD1P51178 756 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 ZSCAN10Q96SZ4 725 aaPredicted RBP17.09■□□□□ 0.33
TTC39A-208ENST00000413473 NOL10Q9BSC4 688 aaKnown RBP17.09■□□□□ 0.33
TTC39A-208ENST00000413473 PARP3Q9Y6F1 533 aa17.09■□□□□ 0.33
TTC39A-208ENST00000413473 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.33
TTC39A-208ENST00000413473 KIF20AO95235 890 aa17.08■□□□□ 0.33
TTC39A-208ENST00000413473 NR1I3Q14994 352 aa17.08■□□□□ 0.33
TTC39A-208ENST00000413473 TOGARAM2Q6ZUX3 1019 aa17.08■□□□□ 0.33
TTC39A-208ENST00000413473 MNS1Q8NEH6 495 aa17.08■□□□□ 0.33
TTC39A-208ENST00000413473 RIOK1Q9BRS2 568 aaKnown RBP17.08■□□□□ 0.33
TTC39A-208ENST00000413473 CARD6Q9BX69 1037 aa17.08■□□□□ 0.33
TTC39A-208ENST00000413473 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.33
TTC39A-208ENST00000413473 RTL9Q8NET4 1388 aa17.08■□□□□ 0.32
TTC39A-208ENST00000413473 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
TTC39A-208ENST00000413473 CASP1P29466 404 aa17.08■□□□□ 0.32
TTC39A-208ENST00000413473 KRT2P35908 639 aa17.08■□□□□ 0.32
TTC39A-208ENST00000413473 CLCN6P51797 869 aa17.08■□□□□ 0.32
TTC39A-208ENST00000413473 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.32
TTC39A-208ENST00000413473 FUT2Q10981 343 aa17.08■□□□□ 0.32
TTC39A-208ENST00000413473 ACSBG1Q96GR2 724 aa17.08■□□□□ 0.32
TTC39A-208ENST00000413473 PHF20Q9BVI0 1012 aa17.08■□□□□ 0.32
TTC39A-208ENST00000413473 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.32
TTC39A-208ENST00000413473 PLEKHA8P1O95397 391 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms