RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 THAP5Q7Z6K1 395 aa5□□□□□ -1.61
HMGB3P2-201ENST00000411913 GRIN3AQ8TCU5 1115 aa5□□□□□ -1.61
HMGB3P2-201ENST00000411913 PCDHA4Q9UN74 947 aa5□□□□□ -1.61
HMGB3P2-201ENST00000411913 CAPN6Q9Y6Q1 641 aa5□□□□□ -1.61
HMGB3P2-201ENST00000411913 CNTNAP4Q9C0A0 1308 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 DNAJC25-GNG10A0A024R161 153 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 FOXD2O60548 495 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 TRIM37O94972 964 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 SERPINB4P48594 390 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 ERVFC1P60507 584 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 PI16Q6UXB8 463 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 CACNA2D2Q9NY47 1150 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 ST14Q9Y5Y6 855 aa4.99□□□□□ -1.61
HMGB3P2-201ENST00000411913 SRFP11831 508 aa4.98□□□□□ -1.61
HMGB3P2-201ENST00000411913 RALGPS1Q5JS13 557 aa4.98□□□□□ -1.61
HMGB3P2-201ENST00000411913 ZNF746Q6NUN9 644 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P2-201ENST00000411913 DBX2Q6ZNG2 339 aa4.98□□□□□ -1.61
HMGB3P2-201ENST00000411913 TMEM59LQ9UK28 342 aa4.98□□□□□ -1.61
HMGB3P2-201ENST00000411913 PRAMEF27A3QJZ7 478 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 SYN1P17600 705 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 BMP6P22004 513 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 CYP7A1P22680 504 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 LRRC14Q15048 493 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 TMEM132EQ6IEE7 984 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 B4GALNT3Q6L9W6 998 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 LLGL2Q6P1M3 1020 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 NXPE4Q6UWF7 544 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 TPTE2Q6XPS3 522 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 MFSD2AQ8NA29 543 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 DMRTB1Q96MA1 342 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 NECAB3Q96P71 396 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
HMGB3P2-201ENST00000411913 ARID3CA6NKF2 412 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 HPXP02790 462 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 TRHRP34981 398 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 DLG4P78352 724 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 LETMD1Q6P1Q0 360 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 TMPRSS7Q7RTY8 843 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 RIN3Q8TB24 985 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 BAHD1Q8TBE0 780 aaPredicted RBP4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 CEP44Q9C0F1 390 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 RNF32Q9H0A6 362 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 ADAMTS10Q9H324 1103 aa4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 CNOT6Q9ULM6 557 aaKnown RBP4.96□□□□□ -1.62
HMGB3P2-201ENST00000411913 A0A0G2JLL6 359 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 PAGE1O75459 146 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 IGHA2P01877 340 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 ETF1P62495 437 aaKnown RBP4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 SLBPQ14493 270 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 NFIXQ14938 502 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 TCERG1LQ5VWI1 586 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 HDXQ7Z353 690 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 ZNF605Q86T29 641 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 CREG2Q8IUH2 290 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 XAGE3Q8WTP9 111 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 FBRSQ9HAH7 460 aa4.95□□□□□ -1.62
HMGB3P2-201ENST00000411913 ENC1O14682 589 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 ESR1P03372 595 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 KIR3DL1P43629 444 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 TNK2Q07912 1038 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 INPP5AQ14642 412 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 NKG7Q16617 165 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 ZNF385BQ569K4 471 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 ALKBH8Q96BT7 664 aaKnown RBP4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 COX4I2Q96KJ9 171 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 WNT10AQ9GZT5 417 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 MCOLN1Q9GZU1 580 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 SLC6A17Q9H1V8 727 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 C19orf44Q9H6X5 657 aa4.94□□□□□ -1.62
HMGB3P2-201ENST00000411913 RFXAPO00287 272 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 SEMA7AO75326 666 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 FBXO24O75426 580 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 GSTT1P30711 240 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 SCARA3Q6AZY7 606 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 LRFN4Q6PJG9 635 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 CDH24Q86UP0 819 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 IRF2BP1Q8IU81 584 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 HID1Q8IV36 788 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 C3orf58Q8NDZ4 430 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 KCNC2Q96PR1 638 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 CYP8B1Q9UNU6 501 aa4.93□□□□□ -1.62
HMGB3P2-201ENST00000411913 PEX10O60683 326 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 PDE6BP35913 854 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 CAP2P40123 477 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 PRAMEF13Q5VWM6 474 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 PRRT2Q7Z6L0 340 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 TMEM151BQ8IW70 566 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 LILRA2Q8N149 483 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 CCDC82Q8N4S0 544 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 OXR1Q8N573 874 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 MARCH10Q8NA82 808 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 PDZD8Q8NEN9 1154 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 PIWIL2Q8TC59 973 aaKnown RBP4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 SYTL4Q96C24 671 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 PLPPR2Q96GM1 343 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 KCTD3Q9Y597 815 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 GTF3C3Q9Y5Q9 886 aa4.92□□□□□ -1.62
HMGB3P2-201ENST00000411913 MYOCOSA0A1B0GUC4 107 aa4.91□□□□□ -1.62
HMGB3P2-201ENST00000411913 WASH4PA8MWX3 477 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms