RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 JAG1P78504 1218 aa27.11■■□□□ 1.93
MSH6-202ENST00000411819 SH3D19Q5HYK7 790 aa27.11■■□□□ 1.93
MSH6-202ENST00000411819 TMED8Q6PL24 325 aaPredicted RBP27.11■■□□□ 1.93
MSH6-202ENST00000411819 WDR18Q9BV38 432 aa27.11■■□□□ 1.93
MSH6-202ENST00000411819 TMOD4Q9NZQ9 345 aa27.11■■□□□ 1.93
MSH6-202ENST00000411819 GOLIM4O00461 696 aa27.1■■□□□ 1.93
MSH6-202ENST00000411819 BACE1P56817 501 aa27.1■■□□□ 1.93
MSH6-202ENST00000411819 FAM110CQ1W6H9 321 aa27.1■■□□□ 1.93
MSH6-202ENST00000411819 C20orf194Q5TEA3 1177 aa27.1■■□□□ 1.93
MSH6-202ENST00000411819 DDX60LQ5H9U9 1706 aaKnown RBP27.1■■□□□ 1.93
MSH6-202ENST00000411819 MKI67P46013 3256 aaKnown RBP27.09■■□□□ 1.93
MSH6-202ENST00000411819 UBXN2AP68543 259 aa27.09■■□□□ 1.93
MSH6-202ENST00000411819 SLC9C2Q5TAH2 1124 aa27.09■■□□□ 1.93
MSH6-202ENST00000411819 SLAIN1Q8ND83 568 aa27.09■■□□□ 1.93
MSH6-202ENST00000411819 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.09■■□□□ 1.93
MSH6-202ENST00000411819 ASCC2Q9H1I8 757 aaPredicted RBP27.09■■□□□ 1.93
MSH6-202ENST00000411819 GINM1Q9NU53 330 aa27.09■■□□□ 1.93
MSH6-202ENST00000411819 TAOK2Q9UL54 1235 aa27.09■■□□□ 1.93
MSH6-202ENST00000411819 MAGEB6P1A0A0J9YX57 407 aa27.08■■□□□ 1.93
MSH6-202ENST00000411819 PDE6AP16499 860 aa27.08■■□□□ 1.93
MSH6-202ENST00000411819 GCLCP48506 637 aaPredicted RBP27.08■■□□□ 1.93
MSH6-202ENST00000411819 FLT3LGP49771 235 aa27.08■■□□□ 1.93
MSH6-202ENST00000411819 IRX3P78415 501 aaPredicted RBP27.08■■□□□ 1.93
MSH6-202ENST00000411819 COA7Q96BR5 231 aa27.08■■□□□ 1.93
MSH6-202ENST00000411819 USP17L10C9JJH3 530 aa27.07■■□□□ 1.92
MSH6-202ENST00000411819 ADCY3O60266 1144 aa27.07■■□□□ 1.92
MSH6-202ENST00000411819 TTC6Q86TZ1 520 aa27.07■■□□□ 1.92
MSH6-202ENST00000411819 RIOK1Q9BRS2 568 aaKnown RBP27.07■■□□□ 1.92
MSH6-202ENST00000411819 SERPINB13Q9UIV8 391 aa27.07■■□□□ 1.92
MSH6-202ENST00000411819 DOCK3Q8IZD9 2030 aa27.06■■□□□ 1.92
MSH6-202ENST00000411819 SLC34A2O95436 690 aa27.06■■□□□ 1.92
MSH6-202ENST00000411819 GH2P01242 217 aa27.06■■□□□ 1.92
MSH6-202ENST00000411819 CCL5P13501 91 aa27.06■■□□□ 1.92
MSH6-202ENST00000411819 PDE3AQ14432 1141 aa27.06■■□□□ 1.92
MSH6-202ENST00000411819 EDC3Q96F86 508 aaKnown RBP27.06■■□□□ 1.92
MSH6-202ENST00000411819 CRNKL1Q9BZJ0 848 aaKnown RBP27.06■■□□□ 1.92
MSH6-202ENST00000411819 EHD4Q9H223 541 aa27.06■■□□□ 1.92
MSH6-202ENST00000411819 ZNF532Q9HCE3 1301 aa27.06■■□□□ 1.92
MSH6-202ENST00000411819 C19orf81C9J6K1 198 aa27.05■■□□□ 1.92
MSH6-202ENST00000411819 ELNP15502 786 aa27.05■■□□□ 1.92
MSH6-202ENST00000411819 RNF208Q9H0X6 261 aa27.05■■□□□ 1.92
MSH6-202ENST00000411819 BOLA2Q9H3K6 86 aa27.05■■□□□ 1.92
MSH6-202ENST00000411819 POLR3DP05423 398 aaPredicted RBP27.04■■□□□ 1.92
MSH6-202ENST00000411819 FEZ1Q99689 392 aa27.04■■□□□ 1.92
MSH6-202ENST00000411819 PAG1Q9NWQ8 432 aa27.04■■□□□ 1.92
MSH6-202ENST00000411819 TATDN1Q6P1N9 297 aa27.03■■□□□ 1.92
MSH6-202ENST00000411819 NKX2-3Q8TAU0 364 aa27.03■■□□□ 1.92
MSH6-202ENST00000411819 SHISA4Q96DD7 197 aa27.03■■□□□ 1.92
MSH6-202ENST00000411819 IRF5Q13568 498 aa27.02■■□□□ 1.92
MSH6-202ENST00000411819 RAB3GAP1Q15042 981 aa27.02■■□□□ 1.92
MSH6-202ENST00000411819 ZYXQ15942 572 aaKnown RBP27.02■■□□□ 1.92
MSH6-202ENST00000411819 CERKLQ49MI3 558 aaPredicted RBP27.02■■□□□ 1.92
MSH6-202ENST00000411819 LRRCC1Q9C099 1032 aa27.02■■□□□ 1.92
MSH6-202ENST00000411819 MYH7P12883 1935 aa27.02■■□□□ 1.92
MSH6-202ENST00000411819 INHAP05111 366 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 GJB1P08034 283 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 HOXA7P31268 230 aaPredicted RBP27.01■■□□□ 1.91
MSH6-202ENST00000411819 PLCD1P51178 756 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 LCORLQ8N3X6 602 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 PXYLP1Q8TE99 480 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 SDR42E1Q8WUS8 393 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 UNC93B1Q9H1C4 597 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 MCM9Q9NXL9 1143 aa27.01■■□□□ 1.91
MSH6-202ENST00000411819 TCRBV5S4A2TA0A5A2 114 aa27■■□□□ 1.91
MSH6-202ENST00000411819 ATP5JP18859 108 aa27■■□□□ 1.91
MSH6-202ENST00000411819 HERVK_113P62684 666 aa27■■□□□ 1.91
MSH6-202ENST00000411819 ABCB5Q2M3G0 1257 aa27■■□□□ 1.91
MSH6-202ENST00000411819 USP17L2Q6R6M4 530 aa27■■□□□ 1.91
MSH6-202ENST00000411819 P2RX7Q99572 595 aaKnown RBP27■■□□□ 1.91
MSH6-202ENST00000411819 CABP5Q9NP86 173 aa27■■□□□ 1.91
MSH6-202ENST00000411819 GJA8P48165 433 aa26.99■■□□□ 1.91
MSH6-202ENST00000411819 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.99■■□□□ 1.91
MSH6-202ENST00000411819 ARMT1Q9H993 441 aa26.99■■□□□ 1.91
MSH6-202ENST00000411819 EMILIN3Q9NT22 766 aa26.99■■□□□ 1.91
MSH6-202ENST00000411819 MORF4L1Q9UBU8 362 aa26.99■■□□□ 1.91
MSH6-202ENST00000411819 MYH8P13535 1937 aa26.98■■□□□ 1.91
MSH6-202ENST00000411819 SMARCA5O60264 1052 aaPredicted RBP26.98■■□□□ 1.91
MSH6-202ENST00000411819 SHMT1P34896 483 aa26.98■■□□□ 1.91
MSH6-202ENST00000411819 GCC1Q96CN9 775 aa26.98■■□□□ 1.91
MSH6-202ENST00000411819 PEX10O60683 326 aa26.97■■□□□ 1.91
MSH6-202ENST00000411819 ADD2P35612 726 aa26.97■■□□□ 1.91
MSH6-202ENST00000411819 U2AF1L4Q8WU68 220 aaKnown RBP26.97■■□□□ 1.91
MSH6-202ENST00000411819 HAUS7Q99871 368 aa26.97■■□□□ 1.91
MSH6-202ENST00000411819 PAGR1Q9BTK6 254 aa26.97■■□□□ 1.91
MSH6-202ENST00000411819 BAZ2AQ9UIF9 1905 aaKnown RBP26.96■■□□□ 1.91
MSH6-202ENST00000411819 MBD4O95243 580 aa26.96■■□□□ 1.91
MSH6-202ENST00000411819 EVX2Q03828 476 aa26.96■■□□□ 1.91
MSH6-202ENST00000411819 SLFNL1Q499Z3 407 aa26.96■■□□□ 1.91
MSH6-202ENST00000411819 TXNRD2Q9NNW7 524 aa26.96■■□□□ 1.91
MSH6-202ENST00000411819 DCP1AQ9NPI6 582 aaPredicted RBP26.96■■□□□ 1.91
MSH6-202ENST00000411819 PLXNB2O15031 1838 aa26.95■■□□□ 1.91
MSH6-202ENST00000411819 MPHOSPH10O00566 681 aaKnown RBP26.95■■□□□ 1.9
MSH6-202ENST00000411819 USP14P54578 494 aa26.95■■□□□ 1.9
MSH6-202ENST00000411819 GPRC5AQ8NFJ5 357 aa26.95■■□□□ 1.9
MSH6-202ENST00000411819 GTF3C2Q8WUA4 911 aaPredicted RBP26.95■■□□□ 1.9
MSH6-202ENST00000411819 C12orf42Q96LP6 360 aa26.95■■□□□ 1.9
MSH6-202ENST00000411819 CYP2D6P10635 497 aa26.94■■□□□ 1.9
MSH6-202ENST00000411819 GABPAQ06546 454 aa26.94■■□□□ 1.9
MSH6-202ENST00000411819 CCAR1Q8IX12 1150 aaKnown RBP26.94■■□□□ 1.9
MSH6-202ENST00000411819 ERVK-9P63128 1117 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms