RNA–Protein interactions for RNA: ENST00000410513.1

RN7SKP56-201, Transcript of RNA, 7SK small nuclear pseudogene 56, humanhuman

BASIC

Gene RN7SKP56, Length 331 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP56-201ENST00000410513 CCDC39Q9UFE4 941 aa6.4□□□□□ -1.38
RN7SKP56-201ENST00000410513 OAS3Q9Y6K5 1087 aaKnown RBP6.4□□□□□ -1.38
RN7SKP56-201ENST00000410513 GRIN3BO60391 1043 aa6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 BPNT1O95861 308 aa6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 VAMP1P23763 118 aa6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 ZNF76P36508 570 aa6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 MPP2Q14168 576 aa6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 ZNF296Q8WUU4 475 aaPredicted RBP6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 TMEM87BQ96K49 555 aa6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 BSDC1Q9NW68 430 aaPredicted RBP6.39□□□□□ -1.39
RN7SKP56-201ENST00000410513 UPK3BL1B0FP48 263 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 UPK3BL2E5RIL1 263 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 DNAJA2O60884 412 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 PLCG1P19174 1290 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 ITIH2P19823 946 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 GP2P55259 537 aaKnown RBP6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 ZNF574Q6ZN55 896 aaPredicted RBP6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 VSIG10LQ86VR7 867 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 MCATQ8IVS2 390 aaKnown RBP6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 LRRC3Q9BY71 257 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 BCL11AQ9H165 835 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 UBP1Q9NZI7 540 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 ADAM30Q9UKF2 790 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 PRR36Q9H6K5 1346 aa6.38□□□□□ -1.39
RN7SKP56-201ENST00000410513 PRR33A8MZF0 331 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 IGF2BP3O00425 579 aaKnown RBP eCLIP6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 HTR3BO95264 441 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 WNT11O96014 354 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 CEACAM5P06731 702 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 ZEB1P37275 1124 aaPredicted RBP6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 CD96P40200 585 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 PDE4BQ07343 736 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 TMEM201Q5SNT2 666 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 LETMD1Q6P1Q0 360 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 SPRED2Q7Z698 418 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 SPACA3Q8IXA5 215 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 MFSD2AQ8NA29 543 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 NETO1Q8TDF5 533 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 BCL7CQ8WUZ0 217 aaPredicted RBP6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 MKNK2Q9HBH9 465 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 REV1Q9UBZ9 1251 aa6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 SUPT16HQ9Y5B9 1047 aaKnown RBP6.37□□□□□ -1.39
RN7SKP56-201ENST00000410513 BNIP3Q12983 259 aa6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 NKPD1Q17RQ9 610 aa6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 SLC6A19Q695T7 634 aa6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 METTL16Q86W50 562 aaKnown RBP6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 DNAJB8Q8NHS0 232 aa6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 EAF1Q96JC9 268 aaPredicted RBP6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 TNKS2Q9H2K2 1166 aa6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 BRMS1Q9HCU9 246 aa6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 PAK6Q9NQU5 681 aaPredicted RBP6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 PRDM5Q9NQX1 630 aaPredicted RBP6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 METTL5Q9NRN9 209 aaKnown RBP6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 GTF2IRD1Q9UHL9 959 aa6.36□□□□□ -1.39
RN7SKP56-201ENST00000410513 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 CHURC1-FNTBB4DL54 471 aa6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 IFI16Q16666 785 aaKnown RBP6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 CDH24Q86UP0 819 aa6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 ABI1Q8IZP0 508 aa6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 FLCNQ8NFG4 579 aa6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 PPP1R13LQ8WUF5 828 aa6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 ZNF428Q96B54 188 aa6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 TPX2Q9ULW0 747 aaKnown RBP6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 ANGEL1Q9UNK9 670 aaKnown RBP6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 MAPK8IP1Q9UQF2 711 aa6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 CCDC9Q9Y3X0 531 aaKnown RBP6.35□□□□□ -1.39
RN7SKP56-201ENST00000410513 ROBO2Q9HCK4 1378 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 SCAMP3O14828 347 aaKnown RBP6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 RACK1P63244 317 aaKnown RBP6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 CWF19L2Q2TBE0 894 aaKnown RBP6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 SEZ6Q53EL9 994 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 ARHGAP27Q6ZUM4 889 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 FAM13CQ8NE31 585 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 RNF34Q969K3 372 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 KLHL3Q9UH77 587 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 PCDHB14Q9Y5E9 798 aa6.34□□□□□ -1.39
RN7SKP56-201ENST00000410513 ZNF865P0CJ78 1059 aaPredicted RBP6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 CD8BP10966 210 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 HDLBPQ00341 1268 aaKnown RBP6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 CLCQ05315 142 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 APOBRQ0VD83 1088 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 C9orf131Q5VYM1 1079 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 C22orf34Q6ZV56 151 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 KIAA0825Q8IV33 1275 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 CYB5D2Q8WUJ1 264 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 SPON2Q9BUD6 331 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 NT5C1AQ9BXI3 368 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 DDX41Q9UJV9 622 aaKnown RBP6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 SLC5A6Q9Y289 635 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 CAPN6Q9Y6Q1 641 aa6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 COL17A1Q9UMD9 1497 aaPredicted RBP6.33□□□□□ -1.4
RN7SKP56-201ENST00000410513 TMEM265A0A087WTH1 108 aa6.32□□□□□ -1.4
RN7SKP56-201ENST00000410513 ATE1O95260 518 aa6.32□□□□□ -1.4
RN7SKP56-201ENST00000410513 PRKCQQ04759 706 aa6.32□□□□□ -1.4
RN7SKP56-201ENST00000410513 AOC3Q16853 763 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 251.8 ms