RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CCDC171Q6TFL3 1326 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 NUCKS1Q9H1E3 243 aaKnown RBP12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 SLC1A4P43007 532 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 CCDC122Q5T0U0 273 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 MAP3K5Q99683 1374 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 CALCRLQ16602 461 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 SCYL1Q96KG9 808 aa12.48□□□□□ -0.41
PRPF40A-202ENST00000410080 GSTA1P08263 222 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 GSTA2P09210 222 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 RNASELQ05823 741 aaKnown RBP12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 PPP2R5AQ15172 486 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 RILPQ96NA2 401 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 RAB3IPQ96QF0 476 aaPredicted RBP12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 RPS6KC1Q96S38 1066 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 VPS18Q9P253 973 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 USP21Q9UK80 565 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 PAXBP1Q9Y5B6 917 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 TXKP42681 527 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 LRFN2Q9ULH4 789 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 A2MP01023 1474 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 TYW5A2RUC4 315 aaKnown RBP12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 CASP2P42575 452 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 SKIV2LQ15477 1246 aaKnown RBP12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 HAUS3Q68CZ6 603 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 RNF217Q8TC41 542 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 DKC1O60832 514 aaKnown RBP eCLIP12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 MBD4O95243 580 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 MICALL1Q8N3F8 863 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 MIPOL1Q8TD10 442 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 CDR2Q01850 454 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 TRIM50Q86XT4 487 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 MRPS27Q92552 414 aaKnown RBP12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 ESYT1Q9BSJ8 1104 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 TRIM31Q9BZY9 425 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 UBN1Q9NPG3 1134 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 PLCH2O75038 1416 aa12.47□□□□□ -0.41
PRPF40A-202ENST00000410080 SPTLC2O15270 562 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 TPH2Q8IWU9 490 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 RALGAPBQ86X10 1494 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 HIBADHP31937 336 aaKnown RBP12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 PDE1AP54750 535 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 PDE4DQ08499 809 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 SULF1Q8IWU6 871 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 CNNM4Q6P4Q7 775 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 ZNF365Q70YC5 407 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 RSAD2Q8WXG1 361 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 CLGNO14967 610 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 BMP2KLQ5H9B9 411 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 PIK3AP1Q6ZUJ8 805 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 OTUD6AQ7L8S5 288 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 FAM89AQ96GI7 184 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 DNAJC25Q9H1X3 360 aa12.46□□□□□ -0.41
PRPF40A-202ENST00000410080 DLGAP5Q15398 846 aa12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 PRR16Q569H4 304 aa12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 MICAL1Q8TDZ2 1067 aa12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 I3L4J1 428 aa12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 KIF11P52732 1056 aa12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 FOXD4Q12950 439 aaPredicted RBP12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 CEP128Q6ZU80 1094 aa12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 ARMT1Q9H993 441 aa12.46□□□□□ -0.42
PRPF40A-202ENST00000410080 TXNDC9O14530 226 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 CASQ2O14958 399 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 LRMPQ12912 555 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 NEDD9Q14511 834 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 SUDS3Q9H7L9 328 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 DNM1Q05193 864 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 CCDC62Q6P9F0 684 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 DPP9Q86TI2 863 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ZNF277Q9NRM2 450 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 NLRX1Q86UT6 975 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 SUPT20HQ8NEM7 779 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ANAPC5Q9UJX4 755 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 C1orf228Q6PIY5 440 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 TAF5LO75529 589 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 SKILP12757 684 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 TGFBRAP1Q8WUH2 860 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ZNF594Q96JF6 807 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 SFMBT1Q9UHJ3 866 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 EIF2AK4Q9P2K8 1649 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ARID4AP29374 1257 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 TNNC1P63316 161 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 IL1RL1Q01638 556 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 SPDYE1Q8NFV5 336 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ALDH1B1P30837 517 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ATP8B2P98198 1209 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 SPAG1Q07617 926 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 KIAA1841Q6NSI8 718 aa12.45□□□□□ -0.42
PRPF40A-202ENST00000410080 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms