RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 GRIN1Q05586 938 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 FMR1Q06787 632 aaKnown RBP eCLIP19.07■□□□□ 0.64
LIMS2-208ENST00000410011 TERF2Q15554 542 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 PARP10Q53GL7 1025 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 UBXN4Q92575 508 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 PARP3Q9Y6F1 533 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 ATP8B1O43520 1251 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 CDK11BP21127 795 aaKnown RBP19.07■□□□□ 0.64
LIMS2-208ENST00000410011 PPARAQ07869 468 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 SPECC1Q5M775 1068 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 SUSD4Q5VX71 490 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 ZHX1Q9UKY1 873 aaPredicted RBP19.07■□□□□ 0.64
LIMS2-208ENST00000410011 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
LIMS2-208ENST00000410011 A0A1B0GTH6 734 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 TADA3O75528 432 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 PCP11498 1178 aaKnown RBP19.06■□□□□ 0.64
LIMS2-208ENST00000410011 CCDC152Q4G0S7 254 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 ARHGAP29Q52LW3 1261 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 SH3RF1Q7Z6J0 888 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 ESR2Q92731 530 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 ARGLU1Q9NWB6 273 aaPredicted RBP19.06■□□□□ 0.64
LIMS2-208ENST00000410011 FANCGO15287 622 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 PRR29P0C7W0 189 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 CLCN6P51797 869 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 NR5A1Q13285 461 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 RRP12Q5JTH9 1297 aaKnown RBP19.06■□□□□ 0.64
LIMS2-208ENST00000410011 MED15Q96RN5 788 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 UBAC1Q9BSL1 405 aa19.06■□□□□ 0.64
LIMS2-208ENST00000410011 PLCH1Q4KWH8 1693 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 IGHMBP2P38935 993 aaKnown RBP19.05■□□□□ 0.64
LIMS2-208ENST00000410011 MAP3K9P80192 1104 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 LRRN4CLQ8ND94 238 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 FERMT2Q96AC1 680 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 SYTL4Q96C24 671 aaPredicted RBP19.05■□□□□ 0.64
LIMS2-208ENST00000410011 PANX2Q96RD6 677 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 CSRNP2Q9H175 543 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 TRIM75PA6NK02 468 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 SEMA3EO15041 775 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 PRPF3O43395 683 aaKnown RBP19.05■□□□□ 0.64
LIMS2-208ENST00000410011 ZRANB2O95218 330 aaKnown RBP eCLIP19.05■□□□□ 0.64
LIMS2-208ENST00000410011 BCAMP50895 628 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 MNS1Q8NEH6 495 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 ZKSCAN3Q9BRR0 538 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 PHF20Q9BVI0 1012 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 CABP5Q9NP86 173 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 BTG4Q9NY30 223 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 RAI14Q9P0K7 980 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 FHOD1Q9Y613 1164 aa19.05■□□□□ 0.64
LIMS2-208ENST00000410011 FGRP09769 529 aa19.04■□□□□ 0.64
LIMS2-208ENST00000410011 FUT2Q10981 343 aa19.04■□□□□ 0.64
LIMS2-208ENST00000410011 NAA15Q9BXJ9 866 aaKnown RBP19.04■□□□□ 0.64
LIMS2-208ENST00000410011 TOMM22Q9NS69 142 aa19.04■□□□□ 0.64
LIMS2-208ENST00000410011 LRP2BPQ9P2M1 347 aa19.04■□□□□ 0.64
LIMS2-208ENST00000410011 ZNF804BA4D1E1 1349 aa19.04■□□□□ 0.64
LIMS2-208ENST00000410011 URI1O94763 535 aaPredicted RBP19.03■□□□□ 0.64
LIMS2-208ENST00000410011 SPATA1Q5VX52 437 aa19.03■□□□□ 0.64
LIMS2-208ENST00000410011 OXER1Q8TDS5 423 aa19.03■□□□□ 0.64
LIMS2-208ENST00000410011 GSDMAQ96QA5 445 aa19.03■□□□□ 0.64
LIMS2-208ENST00000410011 SEC31BQ9NQW1 1179 aa19.03■□□□□ 0.64
LIMS2-208ENST00000410011 RBM28Q9NW13 759 aaKnown RBP19.03■□□□□ 0.64
LIMS2-208ENST00000410011 BCL9LQ86UU0 1499 aa19.03■□□□□ 0.64
LIMS2-208ENST00000410011 EXOC5O00471 708 aa19.03■□□□□ 0.64
LIMS2-208ENST00000410011 AKAP17AQ02040 695 aaKnown RBP19.03■□□□□ 0.64
LIMS2-208ENST00000410011 PKN1Q16512 942 aa19.03■□□□□ 0.64
LIMS2-208ENST00000410011 COL22A1Q8NFW1 1626 aaPredicted RBP19.03■□□□□ 0.64
LIMS2-208ENST00000410011 CALM1P0DP23 149 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 CALM2P0DP24 149 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 CALM3P0DP25 149 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 CASQ1P31415 396 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 INTS5Q6P9B9 1019 aaKnown RBP19.02■□□□□ 0.64
LIMS2-208ENST00000410011 APTXQ7Z2E3 356 aaKnown RBP19.02■□□□□ 0.64
LIMS2-208ENST00000410011 CTAGE1Q96RT6 745 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 CDC5LQ99459 802 aaKnown RBP19.02■□□□□ 0.64
LIMS2-208ENST00000410011 TNKSO95271 1327 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 SNAP23O00161 211 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 CYP7A1P22680 504 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 KRT2P35908 639 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 TAF3Q5VWG9 929 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 NUP133Q8WUM0 1156 aa19.02■□□□□ 0.64
LIMS2-208ENST00000410011 SAMSN1Q9NSI8 373 aaKnown RBP19.02■□□□□ 0.64
LIMS2-208ENST00000410011 NPHP1O15259 732 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 GOLGA8FQ08AF8 430 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 GOLGA8DPQ0D2H9 430 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 CUL4BQ13620 913 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 TMED8Q6PL24 325 aaPredicted RBP19.01■□□□□ 0.63
LIMS2-208ENST00000410011 TMCO3Q6UWJ1 677 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 ZNF771Q7L3S4 317 aaPredicted RBP19.01■□□□□ 0.63
LIMS2-208ENST00000410011 PDILTQ8N807 584 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 ZSCAN10Q96SZ4 725 aaPredicted RBP19.01■□□□□ 0.63
LIMS2-208ENST00000410011 BRIP1Q9BX63 1249 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 AKR1B15C9JRZ8 316 aaPredicted RBP19.01■□□□□ 0.63
LIMS2-208ENST00000410011 PNMA6AP0CW24 399 aaPredicted RBP19.01■□□□□ 0.63
LIMS2-208ENST00000410011 PBX1P40424 430 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 CHRNDQ07001 517 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 CDKAL1Q5VV42 579 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 USP49Q70CQ1 688 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 CCDC82Q8N4S0 544 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 GPR161Q8N6U8 529 aaKnown RBP19.01■□□□□ 0.63
LIMS2-208ENST00000410011 KIFC2Q96AC6 838 aa19.01■□□□□ 0.63
LIMS2-208ENST00000410011 SHISA4Q96DD7 197 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms