RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 FAM181BA6NEQ2 426 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 TNFRSF10CO14798 259 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 U2SURPO15042 1029 aaKnown RBP7.67□□□□□ -1.18
LSM5-206ENST00000409987 ASPAP45381 313 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 PREPP48147 710 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 ZYXQ15942 572 aaKnown RBP7.67□□□□□ -1.18
LSM5-206ENST00000409987 DDR2Q16832 855 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 LARP1BQ659C4 914 aaKnown RBP7.67□□□□□ -1.18
LSM5-206ENST00000409987 HID1Q8IV36 788 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 MRPL41Q8IXM3 137 aaKnown RBP7.67□□□□□ -1.18
LSM5-206ENST00000409987 FAM13CQ8NE31 585 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 MICAL1Q8TDZ2 1067 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 TMEM87BQ96K49 555 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 SLC9A7Q96T83 725 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 ST7Q9NRC1 585 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 MSRB2Q9Y3D2 182 aa7.67□□□□□ -1.18
LSM5-206ENST00000409987 SLBPQ14493 270 aaKnown RBP eCLIP7.66□□□□□ -1.18
LSM5-206ENST00000409987 RASA3Q14644 834 aa7.66□□□□□ -1.18
LSM5-206ENST00000409987 NFE2L2Q16236 605 aa7.66□□□□□ -1.18
LSM5-206ENST00000409987 PIDD1Q9HB75 910 aa7.66□□□□□ -1.18
LSM5-206ENST00000409987 FAM221BA6H8Z2 402 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 C9orf172C9J069 976 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 RNGTTO60942 597 aaKnown RBP7.65□□□□□ -1.18
LSM5-206ENST00000409987 NOS3P29474 1203 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 POLR2BP30876 1174 aaKnown RBP7.65□□□□□ -1.18
LSM5-206ENST00000409987 INTS3Q68E01 1043 aaKnown RBP7.65□□□□□ -1.18
LSM5-206ENST00000409987 SLC6A19Q695T7 634 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 ZNF746Q6NUN9 644 aaPredicted RBP7.65□□□□□ -1.18
LSM5-206ENST00000409987 UNC5AQ6ZN44 842 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 SLFN12Q8IYM2 578 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 SCARF2Q96GP6 870 aaPredicted RBP7.65□□□□□ -1.18
LSM5-206ENST00000409987 DEPDC7Q96QD5 511 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.18
LSM5-206ENST00000409987 DPH2Q9BQC3 489 aaPredicted RBP7.65□□□□□ -1.18
LSM5-206ENST00000409987 LTBP3Q9NS15 1303 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 SNTG2Q9NY99 539 aa7.65□□□□□ -1.18
LSM5-206ENST00000409987 FAM86C2PA6NEL3 165 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 B2RBV5 119 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 RAG1P15918 1043 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 GLB1P16278 677 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 CAP2P40123 477 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 IREB2P48200 963 aaKnown RBP7.64□□□□□ -1.19
LSM5-206ENST00000409987 YARSP54577 528 aaKnown RBP7.64□□□□□ -1.19
LSM5-206ENST00000409987 NRG1Q02297 640 aaPredicted RBP7.64□□□□□ -1.19
LSM5-206ENST00000409987 FXNQ16595 210 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 CDC37L1Q7L3B6 337 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 SMYD4Q8IYR2 804 aaPredicted RBP7.64□□□□□ -1.19
LSM5-206ENST00000409987 FAM177A1Q8N128 213 aaPredicted RBP7.64□□□□□ -1.19
LSM5-206ENST00000409987 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 WFDC12Q8WWY7 111 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 MRFAP1L1Q96HT8 127 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 NACC1Q96RE7 527 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 UBL7Q96S82 380 aaPredicted RBP7.64□□□□□ -1.19
LSM5-206ENST00000409987 ACSS3Q9H6R3 686 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 MAPK8IP1Q9UQF2 711 aa7.64□□□□□ -1.19
LSM5-206ENST00000409987 CCDC85CA6NKD9 419 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 GJB6O95452 261 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 APBA3O96018 575 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 CST3P01034 146 aaPredicted RBP7.63□□□□□ -1.19
LSM5-206ENST00000409987 ADGRE1Q14246 886 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 MBTPS1Q14703 1052 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 PRAMEF13Q5VWM6 474 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 CDPF1Q6NVV7 123 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
LSM5-206ENST00000409987 LRP10Q7Z4F1 713 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 FAM46AQ96IP4 442 aaKnown RBP7.63□□□□□ -1.19
LSM5-206ENST00000409987 CEP41Q9BYV8 373 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 CCDC113Q9H0I3 377 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 TBX22Q9Y458 520 aa7.63□□□□□ -1.19
LSM5-206ENST00000409987 CADPSQ9ULU8 1353 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.62□□□□□ -1.19
LSM5-206ENST00000409987 TLDC2A0PJX2 215 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 SART1O43290 800 aaKnown RBP7.62□□□□□ -1.19
LSM5-206ENST00000409987 RAB6AP20340 208 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 JAZF1Q86VZ6 243 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.62□□□□□ -1.19
LSM5-206ENST00000409987 FAM178BQ8IXR5 827 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 PHACTR4Q8IZ21 702 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 KIF2CQ99661 725 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 SSU72Q9NP77 194 aaKnown RBP7.62□□□□□ -1.19
LSM5-206ENST00000409987 SLC12A7Q9Y666 1083 aa7.62□□□□□ -1.19
LSM5-206ENST00000409987 RGS13O14921 159 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 GAS2O43903 313 aaKnown RBP7.61□□□□□ -1.19
LSM5-206ENST00000409987 UBOX5O94941 541 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 USP11P51784 963 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 SGO2Q562F6 1265 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 MRM1Q6IN84 353 aaKnown RBP7.61□□□□□ -1.19
LSM5-206ENST00000409987 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.61□□□□□ -1.19
LSM5-206ENST00000409987 ARMCX6Q7L4S7 300 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 MEGF10Q96KG7 1140 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 PCOLCE2Q9UKZ9 415 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 PCDHB10Q9UN67 800 aa7.61□□□□□ -1.19
LSM5-206ENST00000409987 TMA7Q9Y2S6 64 aaKnown RBP7.61□□□□□ -1.19
LSM5-206ENST00000409987 PDPK1O15530 556 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 DDAH1O94760 285 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 VHLLQ6RSH7 139 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 TMEM192Q8IY95 271 aa7.6□□□□□ -1.19
LSM5-206ENST00000409987 DZIP1LQ8IYY4 767 aaKnown RBP7.6□□□□□ -1.19
LSM5-206ENST00000409987 NLGN1Q8N2Q7 840 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms