RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
CCDC148-203ENST00000409889 LPAR1Q92633 364 aa13.18□□□□□ -0.3
CCDC148-203ENST00000409889 P2RX7Q99572 595 aaKnown RBP13.18□□□□□ -0.3
CCDC148-203ENST00000409889 AS3MTQ9HBK9 375 aa13.18□□□□□ -0.3
CCDC148-203ENST00000409889 GNL3LQ9NVN8 582 aaKnown RBP13.18□□□□□ -0.3
CCDC148-203ENST00000409889 DENND2AQ9ULE3 1009 aa13.18□□□□□ -0.3
CCDC148-203ENST00000409889 REV3LO60673 3130 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 MSCO60682 206 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 HOXA7P31268 230 aaPredicted RBP13.17□□□□□ -0.3
CCDC148-203ENST00000409889 CAP2P40123 477 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 GRIN2CQ14957 1233 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 PLEKHH3Q7Z736 793 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 ZGPATQ8N5A5 531 aaKnown RBP13.17□□□□□ -0.3
CCDC148-203ENST00000409889 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 CWC22Q9HCG8 908 aaKnown RBP13.17□□□□□ -0.3
CCDC148-203ENST00000409889 TMOD4Q9NZQ9 345 aa13.17□□□□□ -0.3
CCDC148-203ENST00000409889 MROH7-TTC4A0A0A0MT08 1334 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 CHD9Q3L8U1 2897 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 EYA2O00167 538 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 SEMA3EO15041 775 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 CNGA1P29973 690 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 BACE1P56817 501 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 RRP1BQ14684 758 aaKnown RBP13.16□□□□□ -0.3
CCDC148-203ENST00000409889 Q3C1V9 767 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 SLF2Q8IX21 1173 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 RNPC3Q96LT9 517 aaKnown RBP13.16□□□□□ -0.3
CCDC148-203ENST00000409889 PRKRIP1Q9H875 184 aaPredicted RBP13.16□□□□□ -0.3
CCDC148-203ENST00000409889 PDLIM7Q9NR12 457 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 FLRT1Q9NZU1 646 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 RBPJLQ9UBG7 517 aa13.16□□□□□ -0.3
CCDC148-203ENST00000409889 PHKA1P46020 1223 aa13.15□□□□□ -0.3
CCDC148-203ENST00000409889 ATP2B3Q16720 1220 aa13.15□□□□□ -0.3
CCDC148-203ENST00000409889 GJC2Q5T442 439 aaPredicted RBP13.15□□□□□ -0.3
CCDC148-203ENST00000409889 SLC39A5Q6ZMH5 540 aa13.15□□□□□ -0.3
CCDC148-203ENST00000409889 ADAMTS19Q8TE59 1207 aa13.15□□□□□ -0.3
CCDC148-203ENST00000409889 EDC3Q96F86 508 aaKnown RBP13.15□□□□□ -0.3
CCDC148-203ENST00000409889 FAM163AQ96GL9 167 aaPredicted RBP13.15□□□□□ -0.3
CCDC148-203ENST00000409889 ABCF2Q9UG63 623 aa13.15□□□□□ -0.3
CCDC148-203ENST00000409889 KBTBD13C9JR72 458 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 DNAJB2P25686 324 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 RHBDL3P58872 404 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 TRIM60Q495X7 471 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 ATG9AQ7Z3C6 839 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 SH3RF1Q7Z6J0 888 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 GTF3C2Q8WUA4 911 aaPredicted RBP13.14□□□□□ -0.31
CCDC148-203ENST00000409889 ATXN2LQ8WWM7 1075 aaKnown RBP13.14□□□□□ -0.31
CCDC148-203ENST00000409889 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 UHRF1Q96T88 793 aaPredicted RBP13.14□□□□□ -0.31
CCDC148-203ENST00000409889 WDR18Q9BV38 432 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 NDUFB9Q9Y6M9 179 aa13.14□□□□□ -0.31
CCDC148-203ENST00000409889 CDK5RAP2Q96SN8 1893 aa13.13□□□□□ -0.31
CCDC148-203ENST00000409889 TRIM43BA6NCK2 446 aa13.13□□□□□ -0.31
CCDC148-203ENST00000409889 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
CCDC148-203ENST00000409889 SNX17Q15036 470 aa13.13□□□□□ -0.31
CCDC148-203ENST00000409889 TRIM43Q96BQ3 446 aaPredicted RBP13.13□□□□□ -0.31
CCDC148-203ENST00000409889 ASB2Q96Q27 587 aa13.13□□□□□ -0.31
CCDC148-203ENST00000409889 MYO9BQ13459 2157 aa13.13□□□□□ -0.31
CCDC148-203ENST00000409889 PLXNA1Q9UIW2 1896 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 GLRX3O76003 335 aaKnown RBP13.12□□□□□ -0.31
CCDC148-203ENST00000409889 ASNSP08243 561 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 CYP2C19P33261 490 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 ATP2B2Q01814 1243 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 RASGRF1Q13972 1273 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 WDR78Q5VTH9 848 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 ARRDC4Q8NCT1 418 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 TRPV1Q8NER1 839 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 SIL1Q9H173 461 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 ZNF576Q9H609 170 aa13.12□□□□□ -0.31
CCDC148-203ENST00000409889 HERC5Q9UII4 1024 aaKnown RBP13.12□□□□□ -0.31
CCDC148-203ENST00000409889 CHD7Q9P2D1 2997 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 FOCADQ5VW36 1801 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
CCDC148-203ENST00000409889 CYBAP13498 195 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 ITGB8P26012 769 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 EPHB4P54760 987 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 CCNA1P78396 465 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 MECOMQ03112 1051 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 SPTY2D1Q68D10 685 aaPredicted RBP13.11□□□□□ -0.31
CCDC148-203ENST00000409889 CCDC102BQ68D86 513 aa13.11□□□□□ -0.31
CCDC148-203ENST00000409889 GAS2L1Q99501 681 aaPredicted RBP13.11□□□□□ -0.31
CCDC148-203ENST00000409889 PDS5AQ29RF7 1337 aaKnown RBP13.11□□□□□ -0.31
CCDC148-203ENST00000409889 SLC15A5A6NIM6 579 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 CNMDO75829 334 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 HOXC6P09630 235 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 PTPREP23469 700 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 ADORA1P30542 326 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 JAG1P78504 1218 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 MRPS5P82675 430 aaKnown RBP13.1□□□□□ -0.31
CCDC148-203ENST00000409889 GRB14Q14449 540 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 C1orf53Q5VUE5 145 aa13.1□□□□□ -0.31
CCDC148-203ENST00000409889 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms