RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 NT5DC1Q5TFE4 455 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 PDILTQ8N807 584 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 SMARCE1Q969G3 411 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 NACAP1Q9BZK3 213 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 PPP2R2CQ9Y2T4 447 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
LYSMD4-204ENST00000409796 ZSCAN12O43309 604 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 URI1O94763 535 aaPredicted RBP17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 BCAMP50895 628 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 CLCN6P51797 869 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 USP49Q70CQ1 688 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 MIGA1Q8NAN2 632 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 MLKLQ8NB16 471 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 PNPLA7Q6ZV29 1317 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 ERICH2A1L162 156 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 ZNF654Q8IZM8 581 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 ENOX1Q8TC92 643 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 MED15Q96RN5 788 aa17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 SRPRBQ9Y5M8 271 aaKnown RBP17.35■□□□□ 0.37
LYSMD4-204ENST00000409796 ACTN4O43707 911 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 GNAT2P19087 354 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 CDK11BP21127 795 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 IL6STP40189 918 aaPredicted RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 TERF2Q15554 542 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 FAM177A1Q8N128 213 aaPredicted RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 TC2NQ8N9U0 490 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 FANCBQ8NB91 859 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 BAG1Q99933 345 aaPredicted RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 CSRNP2Q9H175 543 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 CABP5Q9NP86 173 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 DACH1Q9UI36 760 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 ADKP55263 362 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 CARD6Q9BX69 1037 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 ST7Q9NRC1 585 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 SAMSN1Q9NSI8 373 aaKnown RBP17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 BTG4Q9NY30 223 aa17.34■□□□□ 0.37
LYSMD4-204ENST00000409796 CCDC196A0A1B0GTZ2 297 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 SPECC1LQ69YQ0 1117 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 MNS1Q8NEH6 495 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 UBXN4Q92575 508 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 SHISA4Q96DD7 197 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 FAM205CA6NFA0 338 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 PPARAQ07869 468 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 BMS1Q14692 1282 aaKnown RBP17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 TMTC2Q8N394 836 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 TRIML1Q8N9V2 468 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 MYH2Q9UKX2 1941 aa17.33■□□□□ 0.36
LYSMD4-204ENST00000409796 SMIM22K7EJ46 135 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 TADA3O75528 432 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 TOGARAM2Q6ZUX3 1019 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 AK7Q96M32 723 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 UBAC1Q9BSL1 405 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 SRRTQ9BXP5 876 aaKnown RBP17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 CEP131Q9UPN4 1083 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 FHOD1Q9Y613 1164 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 PLCH1Q4KWH8 1693 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 STX10O60499 249 aa17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 RNF41Q9H4P4 317 aaPredicted RBP17.32■□□□□ 0.36
LYSMD4-204ENST00000409796 MINDY4BA8MYZ0 360 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 PLCD1P51178 756 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 KANK3Q6NY19 840 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 NUTM2AQ8IVF1 878 aaPredicted RBP17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 SPATA20Q8TB22 786 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 SDR42E1Q8WUS8 393 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 WDR24Q96S15 920 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 RAI14Q9P0K7 980 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 A0A087X0B3 334 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 RCAN1P53805 252 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 SEC23AQ15436 765 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 IPO4Q8TEX9 1081 aaKnown RBP17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 DHX58Q96C10 678 aa17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 IQSEC3Q9UPP2 1182 aaPredicted RBP17.31■□□□□ 0.36
LYSMD4-204ENST00000409796 TNKSO95271 1327 aa17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 CYP7A1P22680 504 aa17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 GNG11P61952 73 aa17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 VPS54Q9P1Q0 977 aa17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 CASQ1P31415 396 aa17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 NR1I3Q14994 352 aa17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 EARS2Q5JPH6 523 aaKnown RBP17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
LYSMD4-204ENST00000409796 hCG_1642624A0A1W2PR95 340 aa17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 EFCAB8A8MWE9 144 aa17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 PNMA6AP0CW24 399 aaPredicted RBP17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 EIF5P55010 431 aaKnown RBP17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 GOLGA6L9A6NEM1 432 aa17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 TRIM75PA6NK02 468 aa17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 ERCC5P28715 1186 aaPredicted RBP17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 IGHMBP2P38935 993 aaKnown RBP17.29■□□□□ 0.36
LYSMD4-204ENST00000409796 PKN1Q16512 942 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms