RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CYP2D7A0A087X1C5 515 aa37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 A0A0G2JLL6 359 aaPredicted RBP37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 TRIM75PA6NK02 468 aa37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 GNAT2P19087 354 aa37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 C12orf60Q5U649 245 aa37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 PRRT2Q7Z6L0 340 aaPredicted RBP37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 RILPL2Q969X0 211 aa37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 GINM1Q9NU53 330 aa37.38■■■■□ 3.57
TRAF3IP1-203ENST00000409739 USP17L5A8MUK1 530 aa37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 CRHR2Q13324 411 aa37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 GIMAP6Q6P9H5 292 aa37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 CTR9Q6PD62 1173 aa37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 TICAM2Q86XR7 235 aa37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 AMOTL1Q8IY63 956 aa37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 TBC1D2Q9BYX2 928 aa37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 EPB41L4AQ9HCS5 686 aaPredicted RBP37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 ZCCHC17Q9NP64 241 aaKnown RBP37.37■■■■□ 3.57
TRAF3IP1-203ENST00000409739 SMIM22K7EJ46 135 aa37.36■■■■□ 3.57
TRAF3IP1-203ENST00000409739 NOM1Q5C9Z4 860 aaKnown RBP37.36■■■■□ 3.57
TRAF3IP1-203ENST00000409739 ARPP21Q9UBL0 812 aaPredicted RBP37.36■■■■□ 3.57
TRAF3IP1-203ENST00000409739 CERKLQ49MI3 558 aaPredicted RBP37.35■■■■□ 3.57
TRAF3IP1-203ENST00000409739 SLC44A5Q8NCS7 719 aa37.35■■■■□ 3.57
TRAF3IP1-203ENST00000409739 ZNF280CQ8ND82 737 aa37.35■■■■□ 3.57
TRAF3IP1-203ENST00000409739 DYNLL2Q96FJ2 89 aa37.35■■■■□ 3.57
TRAF3IP1-203ENST00000409739 GPR25O00155 361 aa37.34■■■■□ 3.57
TRAF3IP1-203ENST00000409739 GH2P01242 217 aa37.34■■■■□ 3.57
TRAF3IP1-203ENST00000409739 TAF1CQ15572 869 aaPredicted RBP37.34■■■■□ 3.57
TRAF3IP1-203ENST00000409739 CCDC129Q6ZRS4 1044 aa37.34■■■■□ 3.57
TRAF3IP1-203ENST00000409739 ANKRD23Q86SG2 305 aa37.34■■■■□ 3.57
TRAF3IP1-203ENST00000409739 TAOK2Q9UL54 1235 aa37.34■■■■□ 3.57
TRAF3IP1-203ENST00000409739 SPP2Q13103 211 aa37.33■■■■□ 3.57
TRAF3IP1-203ENST00000409739 FAM227BQ96M60 508 aa37.33■■■■□ 3.57
TRAF3IP1-203ENST00000409739 AS3MTQ9HBK9 375 aa37.33■■■■□ 3.57
TRAF3IP1-203ENST00000409739 SWAP70Q9UH65 585 aa37.33■■■■□ 3.57
TRAF3IP1-203ENST00000409739 A0A0D9SFI3 127 aa37.32■■■■□ 3.56
TRAF3IP1-203ENST00000409739 SBK1Q52WX2 424 aa37.32■■■■□ 3.56
TRAF3IP1-203ENST00000409739 ZNF296Q8WUU4 475 aaPredicted RBP37.32■■■■□ 3.56
TRAF3IP1-203ENST00000409739 WDR18Q9BV38 432 aa37.32■■■■□ 3.56
TRAF3IP1-203ENST00000409739 HELLSQ9NRZ9 838 aa37.32■■■■□ 3.56
TRAF3IP1-203ENST00000409739 PATL2C9JE40 543 aaKnown RBP37.31■■■■□ 3.56
TRAF3IP1-203ENST00000409739 ABCB5Q2M3G0 1257 aa37.31■■■■□ 3.56
TRAF3IP1-203ENST00000409739 GPAT2Q6NUI2 795 aa37.31■■■■□ 3.56
TRAF3IP1-203ENST00000409739 FASTKD5Q7L8L6 764 aaKnown RBP37.31■■■■□ 3.56
TRAF3IP1-203ENST00000409739 GREB1LQ9C091 1923 aaPredicted RBP37.3■■■■□ 3.56
TRAF3IP1-203ENST00000409739 APPP05067 770 aa37.3■■■■□ 3.56
TRAF3IP1-203ENST00000409739 TDO2P48775 406 aa37.3■■■■□ 3.56
TRAF3IP1-203ENST00000409739 NMIQ13287 307 aaPredicted RBP37.3■■■■□ 3.56
TRAF3IP1-203ENST00000409739 TTC22Q5TAA0 569 aa37.3■■■■□ 3.56
TRAF3IP1-203ENST00000409739 GADL1Q6ZQY3 521 aa37.3■■■■□ 3.56
TRAF3IP1-203ENST00000409739 C16orf86Q6ZW13 317 aa37.3■■■■□ 3.56
TRAF3IP1-203ENST00000409739 ROBO3Q96MS0 1386 aa37.29■■■■□ 3.56
TRAF3IP1-203ENST00000409739 PDHXO00330 501 aa37.29■■■■□ 3.56
TRAF3IP1-203ENST00000409739 CENPBP07199 599 aaPredicted RBP37.29■■■■□ 3.56
TRAF3IP1-203ENST00000409739 IFNL3Q8IZI9 196 aa37.29■■■■□ 3.56
TRAF3IP1-203ENST00000409739 ZFYVE28Q9HCC9 887 aa37.29■■■■□ 3.56
TRAF3IP1-203ENST00000409739 FOXP2O15409 715 aa37.28■■■■□ 3.56
TRAF3IP1-203ENST00000409739 GSPT1P15170 499 aaKnown RBP37.28■■■■□ 3.56
TRAF3IP1-203ENST00000409739 CENPQQ7L2Z9 268 aaPredicted RBP37.28■■■■□ 3.56
TRAF3IP1-203ENST00000409739 NEFLP07196 543 aa37.27■■■■□ 3.56
TRAF3IP1-203ENST00000409739 SDSP20132 328 aa37.27■■■■□ 3.56
TRAF3IP1-203ENST00000409739 CDK8P49336 464 aa37.27■■■■□ 3.56
TRAF3IP1-203ENST00000409739 NACAP1Q9BZK3 213 aa37.27■■■■□ 3.56
TRAF3IP1-203ENST00000409739 CABP5Q9NP86 173 aa37.27■■■■□ 3.56
TRAF3IP1-203ENST00000409739 FKTNO75072 461 aa37.26■■■■□ 3.56
TRAF3IP1-203ENST00000409739 HMGCS2P54868 508 aa37.26■■■■□ 3.56
TRAF3IP1-203ENST00000409739 MTMR2Q13614 643 aa37.26■■■■□ 3.56
TRAF3IP1-203ENST00000409739 MCMDC2Q4G0Z9 681 aa37.26■■■■□ 3.56
TRAF3IP1-203ENST00000409739 TNS4Q8IZW8 715 aa37.26■■■■□ 3.56
TRAF3IP1-203ENST00000409739 MINDY4BA8MYZ0 360 aa37.25■■■■□ 3.55
TRAF3IP1-203ENST00000409739 GUCY1A2P33402 732 aa37.25■■■■□ 3.55
TRAF3IP1-203ENST00000409739 DGKZQ13574 1117 aa37.25■■■■□ 3.55
TRAF3IP1-203ENST00000409739 RAB3GAP1Q15042 981 aa37.25■■■■□ 3.55
TRAF3IP1-203ENST00000409739 SH3D19Q5HYK7 790 aa37.25■■■■□ 3.55
TRAF3IP1-203ENST00000409739 PROCA1Q8NCQ7 364 aaPredicted RBP37.25■■■■□ 3.55
TRAF3IP1-203ENST00000409739 AGTPBP1Q9UPW5 1226 aa37.25■■■■□ 3.55
TRAF3IP1-203ENST00000409739 ZSWIM8A7E2V4 1837 aa37.24■■■■□ 3.55
TRAF3IP1-203ENST00000409739 BACE1P56817 501 aa37.24■■■■□ 3.55
TRAF3IP1-203ENST00000409739 ZNF589Q86UQ0 364 aaPredicted RBP37.24■■■■□ 3.55
TRAF3IP1-203ENST00000409739 NAPBQ9H115 298 aa37.24■■■■□ 3.55
TRAF3IP1-203ENST00000409739 MPHOSPH10O00566 681 aaKnown RBP37.23■■■■□ 3.55
TRAF3IP1-203ENST00000409739 TREML2Q5T2D2 321 aa37.23■■■■□ 3.55
TRAF3IP1-203ENST00000409739 VPS53Q5VIR6 699 aa37.23■■■■□ 3.55
TRAF3IP1-203ENST00000409739 ADGRA2Q96PE1 1338 aa37.23■■■■□ 3.55
TRAF3IP1-203ENST00000409739 SLC45A1Q9Y2W3 748 aa37.23■■■■□ 3.55
TRAF3IP1-203ENST00000409739 USP17L10C9JJH3 530 aa37.22■■■■□ 3.55
TRAF3IP1-203ENST00000409739 TLR2O60603 784 aa37.22■■■■□ 3.55
TRAF3IP1-203ENST00000409739 AKR1B1P15121 316 aa37.22■■■■□ 3.55
TRAF3IP1-203ENST00000409739 SEPT2Q15019 361 aa37.22■■■■□ 3.55
TRAF3IP1-203ENST00000409739 PARK7Q99497 189 aaKnown RBP37.22■■■■□ 3.55
TRAF3IP1-203ENST00000409739 CCDC171Q6TFL3 1326 aa37.21■■■■□ 3.55
TRAF3IP1-203ENST00000409739 DIAPH3Q9NSV4 1193 aa37.21■■■■□ 3.55
TRAF3IP1-203ENST00000409739 LAMA4Q16363 1823 aa37.21■■■■□ 3.55
TRAF3IP1-203ENST00000409739 MGAMO43451 1857 aa37.2■■■■□ 3.55
TRAF3IP1-203ENST00000409739 C19orf81C9J6K1 198 aa37.2■■■■□ 3.55
TRAF3IP1-203ENST00000409739 TMEM179Q6ZVK1 233 aa37.2■■■■□ 3.55
TRAF3IP1-203ENST00000409739 CCDC17Q96LX7 622 aa37.2■■■■□ 3.55
TRAF3IP1-203ENST00000409739 HIP1O00291 1037 aa37.19■■■■□ 3.54
TRAF3IP1-203ENST00000409739 CYP2C8P10632 490 aa37.19■■■■□ 3.54
TRAF3IP1-203ENST00000409739 STK11IPQ8N1F8 1099 aa37.19■■■■□ 3.54
TRAF3IP1-203ENST00000409739 CCDC136Q96JN2 1154 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms