RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 YEATS4O95619 227 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 SSBP05455 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
ATG9A-203ENST00000409033 GPSM2P81274 684 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 GRAPQ13588 217 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 GRAPLQ8TC17 118 aaPredicted RBP14.35□□□□□ -0.11
ATG9A-203ENST00000409033 GPCPD1Q9NPB8 672 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 KIF5BP33176 963 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 ZNF75DP51815 510 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 GRIK5Q16478 980 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 CCAR2Q8N163 923 aaKnown RBP14.35□□□□□ -0.11
ATG9A-203ENST00000409033 PNMA1Q8ND90 353 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 EEF2KMTQ96G04 330 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 UBA5Q9GZZ9 404 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 SERTAD1Q9UHV2 236 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 XDHP47989 1333 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 FAM196BA6NMK8 535 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 GRIN1Q05586 938 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 RASGRP2Q7LDG7 609 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 LRRC47Q8N1G4 583 aaKnown RBP14.35□□□□□ -0.11
ATG9A-203ENST00000409033 STAG1Q8WVM7 1258 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 KIAA1468Q9P260 1216 aa14.35□□□□□ -0.11
ATG9A-203ENST00000409033 TTF2Q9UNY4 1162 aaKnown RBP14.35□□□□□ -0.11
ATG9A-203ENST00000409033 FRMPD2Q68DX3 1309 aaPredicted RBP14.34□□□□□ -0.11
ATG9A-203ENST00000409033 SMARCE1Q969G3 411 aa14.34□□□□□ -0.11
ATG9A-203ENST00000409033 IFNAR1P17181 557 aa14.34□□□□□ -0.11
ATG9A-203ENST00000409033 LIFRP42702 1097 aa14.34□□□□□ -0.11
ATG9A-203ENST00000409033 GOLGA8FQ08AF8 430 aa14.34□□□□□ -0.11
ATG9A-203ENST00000409033 GOLGA8DPQ0D2H9 430 aa14.34□□□□□ -0.11
ATG9A-203ENST00000409033 DPP8Q6V1X1 898 aaPredicted RBP14.34□□□□□ -0.11
ATG9A-203ENST00000409033 SEC63Q9UGP8 760 aaKnown RBP14.34□□□□□ -0.11
ATG9A-203ENST00000409033 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
ATG9A-203ENST00000409033 DISP2A7MBM2 1401 aa14.34□□□□□ -0.11
ATG9A-203ENST00000409033 FMNL1O95466 1100 aaPredicted RBP14.33□□□□□ -0.11
ATG9A-203ENST00000409033 NAPAP54920 295 aa14.33□□□□□ -0.11
ATG9A-203ENST00000409033 GSTO1P78417 241 aa14.33□□□□□ -0.11
ATG9A-203ENST00000409033 PDLIM2Q96JY6 352 aa14.33□□□□□ -0.11
ATG9A-203ENST00000409033 BLZF1Q9H2G9 400 aa14.33□□□□□ -0.11
ATG9A-203ENST00000409033 TACC3Q9Y6A5 838 aa14.33□□□□□ -0.11
ATG9A-203ENST00000409033 SLC39A14Q15043 492 aa14.33□□□□□ -0.12
ATG9A-203ENST00000409033 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
ATG9A-203ENST00000409033 SIPA1L3O60292 1781 aaPredicted RBP14.33□□□□□ -0.12
ATG9A-203ENST00000409033 SKILP12757 684 aa14.33□□□□□ -0.12
ATG9A-203ENST00000409033 PARP3Q9Y6F1 533 aa14.33□□□□□ -0.12
ATG9A-203ENST00000409033 MMP1P03956 469 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 MMP10P09238 476 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 SFPQP23246 707 aaKnown RBP eCLIP14.32□□□□□ -0.12
ATG9A-203ENST00000409033 LONRF3Q496Y0 759 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 NOM1Q5C9Z4 860 aaKnown RBP14.32□□□□□ -0.12
ATG9A-203ENST00000409033 USP49Q70CQ1 688 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 SMYD4Q8IYR2 804 aaPredicted RBP14.32□□□□□ -0.12
ATG9A-203ENST00000409033 POLR3EQ9NVU0 708 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 TXLNAP40222 546 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 RILPL1Q5EBL4 403 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 ZNF512BQ96KM6 892 aaPredicted RBP14.32□□□□□ -0.12
ATG9A-203ENST00000409033 EYA3Q99504 573 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 MROH7-TTC4A0A0A0MT08 1334 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 OFD1O75665 1012 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 ERCC3P19447 782 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 UBASH3AP57075 661 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 TXNRD1Q16881 649 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 LETM2Q2VYF4 491 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 JAKMIP3Q5VZ66 844 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 TRMT1LQ7Z2T5 733 aaKnown RBP14.32□□□□□ -0.12
ATG9A-203ENST00000409033 EPSTI1Q96J88 318 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 AGXT2Q9BYV1 514 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 ZHX3Q9H4I2 956 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
ATG9A-203ENST00000409033 PCDHA5Q9Y5H7 936 aa14.32□□□□□ -0.12
ATG9A-203ENST00000409033 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
ATG9A-203ENST00000409033 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 USP17L2Q6R6M4 530 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 RIOK1Q9BRS2 568 aaKnown RBP14.31□□□□□ -0.12
ATG9A-203ENST00000409033 CD209Q9NNX6 404 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
ATG9A-203ENST00000409033 CNTNAP4Q9C0A0 1308 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 SLURP2P0DP57 97 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 TTC38Q5R3I4 469 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 GPIHBP1Q8IV16 184 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 STAG2Q8N3U4 1231 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 XPO4Q9C0E2 1151 aaKnown RBP14.31□□□□□ -0.12
ATG9A-203ENST00000409033 CSRNP2Q9H175 543 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 TNNT1P13805 278 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
ATG9A-203ENST00000409033 FMR1NBQ8N0W7 255 aaPredicted RBP14.31□□□□□ -0.12
ATG9A-203ENST00000409033 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 PLCD1P51178 756 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 ALX1Q15699 326 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 PNPLA7Q6ZV29 1317 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 TPM3P06753 285 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 CMA1P23946 247 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 SHC4Q6S5L8 630 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 FBXO33Q7Z6M2 555 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 SGMS1Q86VZ5 419 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 ZBTB9Q96C00 473 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 XIRP1Q702N8 1843 aaKnown RBP14.3□□□□□ -0.12
ATG9A-203ENST00000409033 INF2Q27J81 1249 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 ZNF287Q9HBT7 754 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
ATG9A-203ENST00000409033 PPEF1O14829 653 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms