RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 HMMRO75330 724 aa11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 MAP4K4O95819 1239 aaPredicted RBP11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 LACTBP83111 547 aaPredicted RBP11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 HSP90AB4PQ58FF6 505 aa11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 TREML2Q5T2D2 321 aa11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 GADL1Q6ZQY3 521 aa11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 NOL10Q9BSC4 688 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 LAMA3Q16787 3333 aa11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 FOCADQ5VW36 1801 aa11.72□□□□□ -0.53
NIF3L1-202ENST00000409020 GDF11O95390 407 aa11.71□□□□□ -0.53
NIF3L1-202ENST00000409020 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-202ENST00000409020 RIOK1Q9BRS2 568 aaKnown RBP11.71□□□□□ -0.53
NIF3L1-202ENST00000409020 PTCH2Q9Y6C5 1203 aa11.71□□□□□ -0.53
NIF3L1-202ENST00000409020 POTEFA5A3E0 1075 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 PDE6AP16499 860 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 CAP2P40123 477 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 SPP2Q13103 211 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 TRIM47Q96LD4 638 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 BOLA2Q9H3K6 86 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 PTPRFP10586 1907 aa11.71□□□□□ -0.54
NIF3L1-202ENST00000409020 TCRBV5S4A2TA0A5A2 114 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 MYCP01106 439 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 PLCG2P16885 1265 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 TSHZ3Q63HK5 1081 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 METTL16Q86W50 562 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 PDCL3Q9H2J4 239 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 HERC5Q9UII4 1024 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 ZNF532Q9HCE3 1301 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 PDE4DIPQ5VU43 2346 aa11.7□□□□□ -0.54
NIF3L1-202ENST00000409020 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 BCRP11274 1271 aa11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 HMGCS2P54868 508 aa11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 GSE1Q14687 1217 aa11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 ZNF280CQ8ND82 737 aa11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 SH3TC2Q8TF17 1288 aa11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 DHX36Q9H2U1 1008 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-202ENST00000409020 PEX10O60683 326 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 PSMC4P43686 418 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 USP5P45974 858 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 PLCD1P51178 756 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 LCORLQ8N3X6 602 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 ARMC5Q96C12 935 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 LRRCC1Q9C099 1032 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 PAG1Q9NWQ8 432 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 LAMA2P24043 3122 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 KIAA0100Q14667 2235 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 SMIM22K7EJ46 135 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 ATP5JP18859 108 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 OSBPP22059 807 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 ANP32AP39687 249 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 MTMR2Q13614 643 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 CRACR2BQ8N4Y2 399 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 ZNF333Q96JL9 665 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 ZBTB21Q9ULJ3 1066 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 AGTPBP1Q9UPW5 1226 aa11.68□□□□□ -0.54
NIF3L1-202ENST00000409020 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
NIF3L1-202ENST00000409020 PRKAB2O43741 272 aa11.67□□□□□ -0.54
NIF3L1-202ENST00000409020 CYP2D6P10635 497 aa11.67□□□□□ -0.54
NIF3L1-202ENST00000409020 HAUS7Q99871 368 aa11.67□□□□□ -0.54
NIF3L1-202ENST00000409020 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
NIF3L1-202ENST00000409020 LOC285556D6RIA3 1793 aa11.67□□□□□ -0.54
NIF3L1-202ENST00000409020 IGSF3O75054 1194 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 FMNL1O95466 1100 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 GH2P01242 217 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 HLA-DOAP06340 250 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 PRKCZQ05513 592 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 KIF22Q14807 665 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 TTF1Q15361 905 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 SLC9C1Q4G0N8 1177 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 FOXP4Q8IVH2 680 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 OTUD7AQ8TE49 926 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 CIZ1Q9ULV3 898 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 GABRQQ9UN88 632 aa11.66□□□□□ -0.54
NIF3L1-202ENST00000409020 MBD4O95243 580 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 SHMT1P34896 483 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 ADD2P35612 726 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 ANKRD13CQ8N6S4 541 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 SMCR8Q8TEV9 937 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 CRBNQ96SW2 442 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 SRRDQ9UH36 339 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 SLC45A1Q9Y2W3 748 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms