RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 PPARAQ07869 468 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 USPL1Q5W0Q7 1092 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 PIK3AP1Q6ZUJ8 805 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 MAPKAPK5Q8IW41 473 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 SSH3Q8TE77 659 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 MYL10Q9BUA6 226 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 DSCC1Q9BVC3 393 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ZBTB21Q9ULJ3 1066 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 NEXMIFQ5QGS0 1516 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 DIP2AQ14689 1571 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 NCAPD2Q15021 1401 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 SSH2Q76I76 1423 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 N4BP3O15049 544 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 CCNT1O60563 726 aaKnown RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 PRDM1O75626 825 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 URI1O94763 535 aaPredicted RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 SYT1P21579 422 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 TYRO3Q06418 890 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 SEPT7Q16181 437 aaKnown RBP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 KIF4BQ2VIQ3 1234 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 CCDC144BQ3MJ40 725 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 ARMC3Q5W041 872 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 KIF18AQ8NI77 898 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 SH2D4AQ9H788 454 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 SPTLC3Q9NUV7 552 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.29□□□□□ -1.72
RGPD4-201ENST00000408999 KIF20BQ96Q89 1820 aa4.29□□□□□ -1.72
RGPD4-201ENST00000408999 EME2A4GXA9 379 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 E7EWF7 191 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 FAM13AO94988 1023 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 HSPA4P34932 840 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CHRNDQ07001 517 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 LRMPQ12912 555 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 GRM1Q13255 1194 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 KRT79Q5XKE5 535 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 BRINP3Q76B58 766 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 LARGE2Q8N3Y3 721 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 FAM200AQ8TCP9 573 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CCDC102AQ96A19 550 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 EDC3Q96F86 508 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 NAP1L4Q99733 375 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 LLPHQ9BRT6 129 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 GREM2Q9H772 168 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 TTC12Q9H892 705 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ARHGEF10LQ9HCE6 1279 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ANGEL1Q9UNK9 670 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CTNND2Q9UQB3 1225 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 LRRC7Q96NW7 1537 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 NRKQ7Z2Y5 1582 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 LOC102724428A0A0B4J2F2 783 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 A0A0D9SFI3 127 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 VWA3AA6NCI4 1184 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 GBP2P32456 591 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 BCAMP50895 628 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 SIK1P57059 783 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 SNW1Q13573 536 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 UBXN4Q92575 508 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 HAUS7Q99871 368 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 QTRT2Q9H974 415 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 GOPCQ9HD26 462 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 PKD2L1Q9P0L9 805 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ARPP21Q9UBL0 812 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 PUF60Q9UHX1 559 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ELP1O95163 1332 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 COL15A1P39059 1388 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 GYG1P46976 350 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 TCP10Q12799 353 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 LETM2Q2VYF4 491 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 FAM47AQ5JRC9 791 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CCDC174Q6PII3 467 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 DTHD1Q6ZMT9 781 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 TBC1D5Q92609 795 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 TRPC5Q9UL62 973 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 MYO3AQ8NEV4 1616 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 M0R2C6 588 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 PSMA7O14818 248 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 RTN2O75298 545 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CIAO1O76071 339 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ECM2O94769 699 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 NEFHP12036 1026 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 KRT13P13646 458 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CETN2P41208 172 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 PTH1RQ03431 593 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CEP135Q66GS9 1140 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 C2CD5Q86YS7 1000 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 EHD4Q9H223 541 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 TLR7Q9NYK1 1049 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 TMOD4Q9NZQ9 345 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 DLC1Q96QB1 1528 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 PPEF1O14829 653 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ZNF853P0CG23 659 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 PTPRFP10586 1907 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ZYXQ15942 572 aaKnown RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ERFEQ4G0M1 354 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 ATL3Q6DD88 541 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CDC37L1Q7L3B6 337 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 NIM1KQ8IY84 436 aa4.28□□□□□ -1.72
RGPD4-201ENST00000408999 SMAP1Q8IYB5 467 aaPredicted RBP4.28□□□□□ -1.72
RGPD4-201ENST00000408999 CTNNBL1Q8WYA6 563 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms