RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 H0YHG0 523 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 IPO7O95373 1038 aaKnown RBP18.65■□□□□ 0.58
CDK11B-204ENST00000407249 SARNPP82979 210 aaKnown RBP18.65■□□□□ 0.58
CDK11B-204ENST00000407249 CFAP100Q494V2 611 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 VSTM4Q8IW00 320 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 MROH5Q6ZUA9 1318 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 EFCAB8A8MWE9 144 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 TRIM66O15016 1216 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
CDK11B-204ENST00000407249 URI1O94763 535 aaPredicted RBP18.64■□□□□ 0.57
CDK11B-204ENST00000407249 FKBP4Q02790 459 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDK11B-204ENST00000407249 ITPK1Q13572 414 aa18.64■□□□□ 0.57
CDK11B-204ENST00000407249 SHC4Q6S5L8 630 aa18.64■□□□□ 0.57
CDK11B-204ENST00000407249 TBC1D22AQ8WUA7 517 aa18.64■□□□□ 0.57
CDK11B-204ENST00000407249 VGLL2Q8N8G2 317 aa18.64■□□□□ 0.57
CDK11B-204ENST00000407249 NCOA7Q8NI08 942 aa18.64■□□□□ 0.57
CDK11B-204ENST00000407249 BCL9LQ86UU0 1499 aa18.64■□□□□ 0.57
CDK11B-204ENST00000407249 PPP6R2O75170 966 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 ADORA1P30542 326 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 C1QTNF12Q5T7M4 302 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 TMEM139Q8IV31 216 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 CCDC85AQ96PX6 553 aaPredicted RBP18.63■□□□□ 0.57
CDK11B-204ENST00000407249 CARD6Q9BX69 1037 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 A0A0G2JS52 829 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 FAM237AA0A1B0GTK4 181 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 ZSCAN12O43309 604 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 TOP1P11387 765 aaKnown RBP18.63■□□□□ 0.57
CDK11B-204ENST00000407249 PNOCQ13519 176 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 TTF1Q15361 905 aaPredicted RBP18.63■□□□□ 0.57
CDK11B-204ENST00000407249 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
CDK11B-204ENST00000407249 VWA3AA6NCI4 1184 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 MYO1BO43795 1136 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 PDE8BO95263 885 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 TPM1P09493 284 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 UQCRFS1P1P0C7P4 283 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 PTPAQ15257 358 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.62■□□□□ 0.57
CDK11B-204ENST00000407249 ANKRD33BA6NCL7 494 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 TMEM232C9JQI7 657 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 ARHGAP6O43182 974 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 GOLGA8FQ08AF8 430 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 GOLGA8DPQ0D2H9 430 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 CLEC4GQ6UXB4 293 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 RALYLQ86SE5 291 aaKnown RBP18.62■□□□□ 0.57
CDK11B-204ENST00000407249 VPS37DQ86XT2 251 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 FANCLQ9NW38 375 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 SPATA31A6Q5VVP1 1343 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
CDK11B-204ENST00000407249 SUSD4Q5VX71 490 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 FNBP4Q8N3X1 1017 aaPredicted RBP18.61■□□□□ 0.57
CDK11B-204ENST00000407249 AIFM3Q96NN9 605 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.61■□□□□ 0.57
CDK11B-204ENST00000407249 PPP2R2CQ9Y2T4 447 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 DDX60Q8IY21 1712 aaKnown RBP18.61■□□□□ 0.57
CDK11B-204ENST00000407249 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 ATP8B1O43520 1251 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 MAP2K2P36507 400 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 INHBEP58166 350 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 PUM3Q15397 648 aaKnown RBP18.61■□□□□ 0.57
CDK11B-204ENST00000407249 MPHOSPH8Q99549 860 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 NUCKS1Q9H1E3 243 aaKnown RBP18.61■□□□□ 0.57
CDK11B-204ENST00000407249 INTS13Q9NVM9 706 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 MYH7P12883 1935 aa18.61■□□□□ 0.57
CDK11B-204ENST00000407249 CCDC152Q4G0S7 254 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 RESP18Q5W5W9 173 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 METTL16Q86W50 562 aaKnown RBP18.6■□□□□ 0.57
CDK11B-204ENST00000407249 FOXP4Q8IVH2 680 aaPredicted RBP18.6■□□□□ 0.57
CDK11B-204ENST00000407249 APPBP2Q92624 585 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 NGLY1Q96IV0 654 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 MAP3K14Q99558 947 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 UBXN6Q9BZV1 441 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 PUS7LQ9H0K6 701 aaKnown RBP18.6■□□□□ 0.57
CDK11B-204ENST00000407249 CNTNAP4Q9C0A0 1308 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 ZNF213O14771 459 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 PTPN21Q16825 1174 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 OLFM4Q6UX06 510 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 SUGP1Q8IWZ8 645 aaKnown RBP18.6■□□□□ 0.57
CDK11B-204ENST00000407249 LPIN2Q92539 896 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 ALG1Q9BT22 464 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 THSD7AQ9UPZ6 1657 aa18.6■□□□□ 0.57
CDK11B-204ENST00000407249 MYH14Q7Z406 1995 aaKnown RBP18.6■□□□□ 0.57
CDK11B-204ENST00000407249 ATRNO75882 1429 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 SEC31AO94979 1220 aaKnown RBP18.59■□□□□ 0.57
CDK11B-204ENST00000407249 RBM5P52756 815 aaKnown RBP eCLIP18.59■□□□□ 0.57
CDK11B-204ENST00000407249 FAM98CQ17RN3 349 aaKnown RBP18.59■□□□□ 0.57
CDK11B-204ENST00000407249 TTC31Q49AM3 519 aaPredicted RBP18.59■□□□□ 0.57
CDK11B-204ENST00000407249 ZMYM6O95789 1325 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 NTSR2O95665 410 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 SETDB1Q15047 1291 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 KRT40Q6A162 431 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 ANKRD20A12PQ8NF67 263 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 PIK3R5Q8WYR1 880 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 CLIC6Q96NY7 704 aa18.59■□□□□ 0.57
CDK11B-204ENST00000407249 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.59■□□□□ 0.57
CDK11B-204ENST00000407249 MAP3K9P80192 1104 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms