RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 RXRAP19793 462 aa13.24□□□□□ -0.29
RAPGEF3-204ENST00000405493 MSANTD4Q8NCY6 345 aa13.24□□□□□ -0.29
RAPGEF3-204ENST00000405493 PLCD4Q9BRC7 762 aa13.24□□□□□ -0.29
RAPGEF3-204ENST00000405493 DNAJC25Q9H1X3 360 aa13.24□□□□□ -0.29
RAPGEF3-204ENST00000405493 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 IFFO1Q0D2I5 559 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 APOBEC3FQ8IUX4 373 aaKnown RBP13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 DYDC1Q8WWB3 177 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 DSCC1Q9BVC3 393 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 DPP9Q86TI2 863 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 ANKRD35Q8N283 1001 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 SPHKAPQ2M3C7 1700 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 CPS1P31327 1500 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 CNGA1P29973 690 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 PPARAQ07869 468 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 TBC1D5Q92609 795 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 DHX58Q96C10 678 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 USP26Q9BXU7 913 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 BCCIPQ9P287 314 aaKnown RBP eCLIP13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
RAPGEF3-204ENST00000405493 RFX1P22670 979 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 OGFRQ9NZT2 677 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 EXOC7Q9UPT5 735 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 SPAG1Q07617 926 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 PRPF4BQ13523 1007 aaKnown RBP13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 UBE3CQ15386 1083 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 GSTTP1A0A1W2PQM5 241 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 SLU7O95391 586 aaKnown RBP13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 HOXD10P28358 340 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 PPP1R2P41236 205 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 ASIC1P78348 528 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 PUF60Q9UHX1 559 aaKnown RBP13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 ZBTB21Q9ULJ3 1066 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 FRMPD1Q5SYB0 1578 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 PSMA7O14818 248 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 FLOT1O75955 427 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 PPM1FP49593 454 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 AXIN2Q9Y2T1 843 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 INO80Q9ULG1 1556 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 USP17L21D6R901 530 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 SPTLC2O15270 562 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 LMAN1P49257 510 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 NCAPG2Q86XI2 1143 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 ADD3Q9UEY8 706 aaKnown RBP13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 SSH2Q76I76 1423 aa13.22□□□□□ -0.29
RAPGEF3-204ENST00000405493 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 EZRP15311 586 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 PLCD1P51178 756 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 GNG11P61952 73 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 FMNL3Q8IVF7 1028 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 CDC42BPBQ9Y5S2 1711 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 PRDM1O75626 825 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 PDE6AP16499 860 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 ATL3Q6DD88 541 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 SYNE4Q8N205 404 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 OTUD7AQ8TE49 926 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 CLRN2A0PK11 232 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 CPA1P15085 419 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 RPL13P26373 211 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 SUSD4Q5VX71 490 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 FOXP4Q8IVH2 680 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 SYNCQ9H7C4 482 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 MLXIPQ9HAP2 919 aa13.21□□□□□ -0.29
RAPGEF3-204ENST00000405493 CFBP00751 764 aa13.21□□□□□ -0.3
RAPGEF3-204ENST00000405493 NONOQ15233 471 aaKnown RBP eCLIP13.21□□□□□ -0.3
RAPGEF3-204ENST00000405493 TRIM6Q9C030 488 aaPredicted RBP13.21□□□□□ -0.3
RAPGEF3-204ENST00000405493 AP5M1Q9H0R1 490 aa13.21□□□□□ -0.3
RAPGEF3-204ENST00000405493 TUBB4AP04350 444 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 TYRO3Q06418 890 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 MYRIPQ8NFW9 859 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 PLEKHF1Q96S99 279 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 STRN3Q13033 797 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 CCDC65Q8IXS2 484 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 ZSWIM4Q9H7M6 989 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 PTGS1P23219 599 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 CTNNA2P26232 953 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 ARHGEF16Q5VV41 709 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 ABCC4O15439 1325 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 NR1I2O75469 434 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 MCM7P33993 719 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 HLTFQ14527 1009 aaKnown RBP eCLIP13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 PI4KBQ9UBF8 816 aa13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 MAP2K1Q02750 393 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-204ENST00000405493 PDE4DQ08499 809 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms