RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 CSRNP1Q96S65 589 aa25.93■■□□□ 1.74
EPCAM-202ENST00000405271 PDRG1Q9NUG6 133 aa25.93■■□□□ 1.74
EPCAM-202ENST00000405271 PPP2R3BQ9Y5P8 575 aa25.93■■□□□ 1.74
EPCAM-202ENST00000405271 TLL2Q9Y6L7 1015 aa25.93■■□□□ 1.74
EPCAM-202ENST00000405271 CPA1P15085 419 aa25.93■■□□□ 1.74
EPCAM-202ENST00000405271 FOXP4Q8IVH2 680 aaPredicted RBP25.93■■□□□ 1.74
EPCAM-202ENST00000405271 ALDH8A1Q9H2A2 487 aaPredicted RBP25.93■■□□□ 1.74
EPCAM-202ENST00000405271 KDM4AO75164 1064 aa25.92■■□□□ 1.74
EPCAM-202ENST00000405271 CDK8P49336 464 aa25.92■■□□□ 1.74
EPCAM-202ENST00000405271 MCM2P49736 904 aa25.92■■□□□ 1.74
EPCAM-202ENST00000405271 EXOSC10Q01780 885 aaKnown RBP25.92■■□□□ 1.74
EPCAM-202ENST00000405271 RASA3Q14644 834 aa25.92■■□□□ 1.74
EPCAM-202ENST00000405271 METTL16Q86W50 562 aaKnown RBP25.92■■□□□ 1.74
EPCAM-202ENST00000405271 CRACR2BQ8N4Y2 399 aaPredicted RBP25.92■■□□□ 1.74
EPCAM-202ENST00000405271 MTA3Q9BTC8 594 aa25.92■■□□□ 1.74
EPCAM-202ENST00000405271 MKNK2Q9HBH9 465 aa25.92■■□□□ 1.74
EPCAM-202ENST00000405271 INCENPQ9NQS7 918 aa25.92■■□□□ 1.74
EPCAM-202ENST00000405271 HERC5Q9UII4 1024 aaKnown RBP25.92■■□□□ 1.74
EPCAM-202ENST00000405271 SCAF8Q9UPN6 1271 aaKnown RBP25.92■■□□□ 1.74
EPCAM-202ENST00000405271 TRIM34Q9BYJ4 488 aa25.91■■□□□ 1.74
EPCAM-202ENST00000405271 TMEM39BQ9GZU3 492 aa25.91■■□□□ 1.74
EPCAM-202ENST00000405271 PRC1O43663 620 aa25.9■■□□□ 1.74
EPCAM-202ENST00000405271 PRDM1O75626 825 aa25.9■■□□□ 1.74
EPCAM-202ENST00000405271 COL9A3Q14050 684 aaPredicted RBP25.9■■□□□ 1.74
EPCAM-202ENST00000405271 ANKRD1Q15327 319 aa25.9■■□□□ 1.74
EPCAM-202ENST00000405271 SLC44A5Q8NCS7 719 aa25.9■■□□□ 1.74
EPCAM-202ENST00000405271 PAPPA2Q9BXP8 1791 aa25.9■■□□□ 1.74
EPCAM-202ENST00000405271 PLIN4Q96Q06 1357 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 RANBP6O60518 1105 aaKnown RBP25.89■■□□□ 1.74
EPCAM-202ENST00000405271 ANTXR2P58335 489 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 CYB5R4Q7L1T6 521 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 FBXL16Q8N461 479 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 TMEM87BQ96K49 555 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 DEFB129Q9H1M3 183 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 ZSWIM5Q9P217 1185 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 OTOFQ9HC10 1997 aa25.89■■□□□ 1.74
EPCAM-202ENST00000405271 RASA1P20936 1047 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 AK2P54819 239 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 BECN1Q14457 450 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 HSCBQ8IWL3 235 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 ZNF444Q8N0Y2 327 aaPredicted RBP25.88■■□□□ 1.73
EPCAM-202ENST00000405271 CDCA5Q96FF9 252 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 TCEANC2Q96MN5 208 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 TEPSINQ96N21 525 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 AGXT2Q9BYV1 514 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 TSPY2A6NKD2 308 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 TBC1D12O60347 775 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 SART3Q15020 963 aaKnown RBP25.88■■□□□ 1.73
EPCAM-202ENST00000405271 HOOK2Q96ED9 719 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 DNAJC18Q9H819 358 aa25.88■■□□□ 1.73
EPCAM-202ENST00000405271 TRPM7Q96QT4 1865 aa25.87■■□□□ 1.73
EPCAM-202ENST00000405271 SHMT1P34896 483 aa25.87■■□□□ 1.73
EPCAM-202ENST00000405271 FGD1P98174 961 aa25.87■■□□□ 1.73
EPCAM-202ENST00000405271 Q6ZUG5 572 aa25.87■■□□□ 1.73
EPCAM-202ENST00000405271 IQCA1Q86XH1 822 aa25.87■■□□□ 1.73
EPCAM-202ENST00000405271 NKX2-3Q8TAU0 364 aa25.87■■□□□ 1.73
EPCAM-202ENST00000405271 WDR33Q9C0J8 1336 aaKnown RBP25.87■■□□□ 1.73
EPCAM-202ENST00000405271 CD2BP2O95400 341 aaKnown RBP25.86■■□□□ 1.73
EPCAM-202ENST00000405271 CYP4F22Q6NT55 531 aa25.86■■□□□ 1.73
EPCAM-202ENST00000405271 PAXIP1Q6ZW49 1069 aaPredicted RBP25.86■■□□□ 1.73
EPCAM-202ENST00000405271 CHST3Q7LGC8 479 aa25.86■■□□□ 1.73
EPCAM-202ENST00000405271 C2orf69Q8N8R5 385 aa25.86■■□□□ 1.73
EPCAM-202ENST00000405271 HHIPL1Q96JK4 782 aa25.86■■□□□ 1.73
EPCAM-202ENST00000405271 CAPNS2Q96L46 248 aa25.86■■□□□ 1.73
EPCAM-202ENST00000405271 CCDC17Q96LX7 622 aa25.86■■□□□ 1.73
EPCAM-202ENST00000405271 UBAC1Q9BSL1 405 aa25.86■■□□□ 1.73
EPCAM-202ENST00000405271 GBA2Q9HCG7 927 aaPredicted RBP25.86■■□□□ 1.73
EPCAM-202ENST00000405271 ERICH2A1L162 156 aa25.85■■□□□ 1.73
EPCAM-202ENST00000405271 TSPY3P0CV98 308 aa25.85■■□□□ 1.73
EPCAM-202ENST00000405271 TSPY8P0CW00 308 aa25.85■■□□□ 1.73
EPCAM-202ENST00000405271 TOB2Q14106 344 aaPredicted RBP25.85■■□□□ 1.73
EPCAM-202ENST00000405271 PRAMEF18Q5VWM3 479 aa25.85■■□□□ 1.73
EPCAM-202ENST00000405271 TATDN1Q6P1N9 297 aa25.85■■□□□ 1.73
EPCAM-202ENST00000405271 MYH6P13533 1939 aa25.85■■□□□ 1.73
EPCAM-202ENST00000405271 HUNKP57058 714 aa25.84■■□□□ 1.73
EPCAM-202ENST00000405271 TFAP4Q01664 338 aa25.84■■□□□ 1.73
EPCAM-202ENST00000405271 MAP3K10Q02779 954 aa25.84■■□□□ 1.73
EPCAM-202ENST00000405271 CCDC178Q5BJE1 867 aa25.84■■□□□ 1.73
EPCAM-202ENST00000405271 CDAN1Q8IWY9 1227 aa25.84■■□□□ 1.73
EPCAM-202ENST00000405271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.84■■□□□ 1.73
EPCAM-202ENST00000405271 ANGEL1Q9UNK9 670 aaKnown RBP25.84■■□□□ 1.73
EPCAM-202ENST00000405271 SH2B2O14492 632 aaPredicted RBP25.83■■□□□ 1.73
EPCAM-202ENST00000405271 ECE1P42892 770 aa25.83■■□□□ 1.73
EPCAM-202ENST00000405271 GRM1Q13255 1194 aa25.83■■□□□ 1.73
EPCAM-202ENST00000405271 FAM47AQ5JRC9 791 aa25.83■■□□□ 1.73
EPCAM-202ENST00000405271 NEDD1Q8NHV4 660 aa25.83■■□□□ 1.73
EPCAM-202ENST00000405271 LRRC2Q9BYS8 371 aa25.83■■□□□ 1.73
EPCAM-202ENST00000405271 TBC1D2Q9BYX2 928 aa25.83■■□□□ 1.73
EPCAM-202ENST00000405271 TCP11L1Q9NUJ3 509 aa25.83■■□□□ 1.73
EPCAM-202ENST00000405271 FAM196BA6NMK8 535 aa25.83■■□□□ 1.72
EPCAM-202ENST00000405271 K7ELQ4 463 aaPredicted RBP25.83■■□□□ 1.72
EPCAM-202ENST00000405271 IFIT3O14879 490 aaKnown RBP25.83■■□□□ 1.72
EPCAM-202ENST00000405271 ZSCAN10Q96SZ4 725 aaPredicted RBP25.83■■□□□ 1.72
EPCAM-202ENST00000405271 TNKSO95271 1327 aa25.83■■□□□ 1.72
EPCAM-202ENST00000405271 SSC5DA1L4H1 1573 aa25.82■■□□□ 1.72
EPCAM-202ENST00000405271 HSPA1AP0DMV8 641 aaKnown RBP25.82■■□□□ 1.72
EPCAM-202ENST00000405271 HSPA1BP0DMV9 641 aaKnown RBP25.82■■□□□ 1.72
EPCAM-202ENST00000405271 LIFRP42702 1097 aa25.82■■□□□ 1.72
EPCAM-202ENST00000405271 TMEM67Q5HYA8 995 aa25.82■■□□□ 1.72
EPCAM-202ENST00000405271 DCAF15Q66K64 600 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms