RNA–Protein interactions for RNA: ENST00000404816.6

LTBP1-203, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LTBP1, Length 6,333 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-203ENST00000404816 NUP160Q12769 1436 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 CCNT1O60563 726 aaKnown RBP20.19■□□□□ 0.82
LTBP1-203ENST00000404816 CRCPO75575 148 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 DYMQ7RTS9 669 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 ANKRD65E5RJM6 399 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 CAPN12Q6ZSI9 719 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 ZNF365Q70YC5 407 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 TMTC1Q8IUR5 882 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 BRD3Q15059 726 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 FAM207AQ9NSI2 230 aaPredicted RBP20.19■□□□□ 0.82
LTBP1-203ENST00000404816 SAR1BQ9Y6B6 198 aa20.19■□□□□ 0.82
LTBP1-203ENST00000404816 TBC1D8O95759 1140 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 TRIM4Q9C037 500 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 MYO1AQ9UBC5 1043 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 PPIP5K1Q6PFW1 1433 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 HARSP12081 509 aaKnown RBP20.18■□□□□ 0.82
LTBP1-203ENST00000404816 CFAP221Q4G0U5 840 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 RILPQ96NA2 401 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 KCNJ14Q9UNX9 436 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 CCDC105Q8IYK2 499 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 IMPG2Q9BZV3 1241 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 RABGAP1Q9Y3P9 1069 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 EIF2AK4Q9P2K8 1649 aaKnown RBP20.18■□□□□ 0.82
LTBP1-203ENST00000404816 CHMP2AO43633 222 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 IFNL2Q8IZJ0 200 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 DPH5Q9H2P9 285 aa20.18■□□□□ 0.82
LTBP1-203ENST00000404816 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 EPB41P11171 864 aaKnown RBP20.17■□□□□ 0.82
LTBP1-203ENST00000404816 MAEAQ7L5Y9 396 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 HS2ST1Q7LGA3 356 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
LTBP1-203ENST00000404816 STAG1Q8WVM7 1258 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 A0A087WWV3 80 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 GMNNO75496 209 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.17■□□□□ 0.82
LTBP1-203ENST00000404816 CCT6BQ92526 530 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 SMIM24O75264 130 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 GYS2P54840 703 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 USP37Q86T82 979 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 SOS1Q07889 1333 aaPredicted RBP20.17■□□□□ 0.82
LTBP1-203ENST00000404816 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
LTBP1-203ENST00000404816 KSR2Q6VAB6 950 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 PHACTR3Q96KR7 559 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 JPH2Q9BR39 696 aaPredicted RBP20.17■□□□□ 0.82
LTBP1-203ENST00000404816 NLRC4Q9NPP4 1024 aa20.17■□□□□ 0.82
LTBP1-203ENST00000404816 ARHGAP42A6NI28 874 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 STX2P32856 288 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 IFT88Q13099 833 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 DMRT2Q9Y5R5 561 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 CALML3P27482 149 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 NELFCDQ8IXH7 590 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 MCM9Q9NXL9 1143 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 GOLGA8KD6RF30 607 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 RGS16O15492 202 aaPredicted RBP20.16■□□□□ 0.82
LTBP1-203ENST00000404816 MTHFSDQ2M296 383 aaKnown RBP20.16■□□□□ 0.82
LTBP1-203ENST00000404816 RRAGAQ7L523 313 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 PPP1R13BQ96KQ4 1090 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 IFIH1Q9BYX4 1025 aaKnown RBP20.16■□□□□ 0.82
LTBP1-203ENST00000404816 CTTNBP2NLQ9P2B4 639 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 SERTAD1Q9UHV2 236 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 SLC9C1Q4G0N8 1177 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 VPS37BQ9H9H4 285 aa20.16■□□□□ 0.82
LTBP1-203ENST00000404816 SH2D4BQ5SQS7 431 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 PHLDB2Q86SQ0 1253 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 UBL4BQ8N7F7 174 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 FAN1Q9Y2M0 1017 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 POLR3AO14802 1390 aaPredicted RBP20.15■□□□□ 0.82
LTBP1-203ENST00000404816 PLCH2O75038 1416 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 EFCAB8A8MWE9 144 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 IL15P40933 162 aaPredicted RBP20.15■□□□□ 0.82
LTBP1-203ENST00000404816 RPS6KA1Q15418 735 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 LONRF2Q1L5Z9 754 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 RNF168Q8IYW5 571 aaPredicted RBP20.15■□□□□ 0.82
LTBP1-203ENST00000404816 FRMD4BQ9Y2L6 1034 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 ME3Q16798 604 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 TXKP42681 527 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 PPP2R5AQ15172 486 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 C2CD5Q86YS7 1000 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 TESK2Q96S53 571 aa20.15■□□□□ 0.82
LTBP1-203ENST00000404816 SAP30BPQ9UHR5 308 aaKnown RBP20.15■□□□□ 0.82
LTBP1-203ENST00000404816 ITIH3Q06033 890 aa20.14■□□□□ 0.82
LTBP1-203ENST00000404816 RBM28Q9NW13 759 aaKnown RBP20.14■□□□□ 0.82
LTBP1-203ENST00000404816 MBD4O95243 580 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 PLCB1Q9NQ66 1216 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 SBNO1A3KN83 1393 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 SPDYE3A6NKU9 549 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 ENC1O14682 589 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 BRD1O95696 1058 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 ATL3Q6DD88 541 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 PEX26Q7Z412 305 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 TEX11Q8IYF3 940 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 CUTAO60888 179 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 MLKLQ8NB16 471 aa20.14■□□□□ 0.81
LTBP1-203ENST00000404816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.14■□□□□ 0.81
LTBP1-203ENST00000404816 HIP1RO75146 1068 aa20.13■□□□□ 0.81
LTBP1-203ENST00000404816 V9GY48 417 aaPredicted RBP20.13■□□□□ 0.81
LTBP1-203ENST00000404816 PPFIA4O75335 1185 aa20.13■□□□□ 0.81
LTBP1-203ENST00000404816 RAB3IPQ96QF0 476 aaPredicted RBP20.13■□□□□ 0.81
LTBP1-203ENST00000404816 GNAQP50148 359 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms