RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 SH2B2O14492 632 aaPredicted RBP10.87□□□□□ -0.67
SMC1B-202ENST00000404354 ERLIN1O75477 346 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 ZNF18P17022 549 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 MATR3P43243 847 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMC1B-202ENST00000404354 ZNF174Q15697 407 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 LDHAL6AQ6ZMR3 332 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 MIGA1Q8NAN2 632 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 PLIN2Q99541 437 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 PIH1D3Q9NQM4 214 aaKnown RBP10.87□□□□□ -0.67
SMC1B-202ENST00000404354 VPS54Q9P1Q0 977 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 LAMA4Q16363 1823 aa10.87□□□□□ -0.67
SMC1B-202ENST00000404354 EIF3CLB5ME19 914 aaKnown RBP10.86□□□□□ -0.67
SMC1B-202ENST00000404354 MAP2K7O14733 419 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 ERCC3P19447 782 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 BRD3Q15059 726 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 IFNL2Q8IZJ0 200 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 AIDAQ96BJ3 306 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 EIF3CQ99613 913 aaKnown RBP10.86□□□□□ -0.67
SMC1B-202ENST00000404354 ARMT1Q9H993 441 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 CNNM1Q9NRU3 951 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 WNT7AO00755 349 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 ATP8B1O43520 1251 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 CDKL5O76039 1030 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 GTF2A1P52655 376 aaPredicted RBP10.86□□□□□ -0.67
SMC1B-202ENST00000404354 DPYDQ12882 1025 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 SLC4A8Q2Y0W8 1093 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 EARS2Q5JPH6 523 aaKnown RBP10.86□□□□□ -0.67
SMC1B-202ENST00000404354 FCHSD1Q86WN1 690 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 GPATCH11Q8N954 259 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 EIF3JO75822 258 aaKnown RBP10.86□□□□□ -0.67
SMC1B-202ENST00000404354 ERVK-24P63145 666 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 NTRK3Q16288 839 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 GOLGA6L1Q8N7Z2 621 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 MLKLQ8NB16 471 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 ENOX1Q8TC92 643 aaKnown RBP10.86□□□□□ -0.67
SMC1B-202ENST00000404354 TSPYL1Q9H0U9 437 aa10.86□□□□□ -0.67
SMC1B-202ENST00000404354 FBXO2Q9UK22 296 aaPredicted RBP10.86□□□□□ -0.67
SMC1B-202ENST00000404354 A0A0G2JS52 829 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 MINDY4BA8MYZ0 360 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 GYPCP04921 128 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 MORC3Q14149 939 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 LRRC31Q6UY01 552 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 KRT28Q7Z3Y7 464 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 CEP112Q8N8E3 955 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 MTMR7Q9Y216 660 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 SYNRGQ9UMZ2 1314 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 KAT6BQ8WYB5 2073 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 TOPAZ1Q8N9V7 1692 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 ZNF185O15231 689 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 RNF40O75150 1001 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 KRT9P35527 623 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 DHX8Q14562 1220 aaKnown RBP10.85□□□□□ -0.67
SMC1B-202ENST00000404354 MICALL1Q8N3F8 863 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 NAPBQ9H115 298 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 ABCC6O95255 1503 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 PHKA1P46020 1223 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 DNA2P51530 1060 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 IFIT5Q13325 482 aaKnown RBP10.85□□□□□ -0.67
SMC1B-202ENST00000404354 RRAGBQ5VZM2 374 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 IGDCC4Q8TDY8 1250 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 NAPGQ99747 312 aaPredicted RBP10.85□□□□□ -0.67
SMC1B-202ENST00000404354 LY9Q9HBG7 655 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 ATG3Q9NT62 314 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 TACC3Q9Y6A5 838 aa10.85□□□□□ -0.67
SMC1B-202ENST00000404354 MFAP3LO75121 409 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 FILIP1LQ4L180 1135 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 MBD4O95243 580 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 PTPREP23469 700 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 LIG3P49916 1009 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 PLCD1P51178 756 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 TTC31Q49AM3 519 aaPredicted RBP10.84□□□□□ -0.67
SMC1B-202ENST00000404354 CAGE1Q8TC20 777 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 SYMPKQ92797 1274 aaKnown RBP10.84□□□□□ -0.67
SMC1B-202ENST00000404354 KDM6AO15550 1401 aaPredicted RBP10.84□□□□□ -0.67
SMC1B-202ENST00000404354 A0A1B0GTH6 734 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
SMC1B-202ENST00000404354 TDO2P48775 406 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 IRX3P78415 501 aaPredicted RBP10.84□□□□□ -0.67
SMC1B-202ENST00000404354 TRIM22Q8IYM9 498 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 MAGEB6Q8N7X4 407 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 MMS19Q96T76 1030 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 DACH1Q9UI36 760 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 MYO6Q9UM54 1294 aa10.84□□□□□ -0.67
SMC1B-202ENST00000404354 MMP1P03956 469 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 NOP2P46087 812 aaKnown RBP10.83□□□□□ -0.68
SMC1B-202ENST00000404354 RTN1Q16799 776 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.83□□□□□ -0.68
SMC1B-202ENST00000404354 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.83□□□□□ -0.68
SMC1B-202ENST00000404354 ADD3Q9UEY8 706 aaKnown RBP10.83□□□□□ -0.68
SMC1B-202ENST00000404354 DUSP10Q9Y6W6 482 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 MACROD2A1Z1Q3 448 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 TRIM49BA6NDI0 452 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 PPARAQ07869 468 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 SLC20A2Q08357 652 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 GREM2Q9H772 168 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 ATP1A1P05023 1023 aaKnown RBP10.83□□□□□ -0.68
SMC1B-202ENST00000404354 ZFYP08048 801 aaPredicted RBP10.83□□□□□ -0.68
SMC1B-202ENST00000404354 MYBL2P10244 700 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 CCT5P48643 541 aa10.83□□□□□ -0.68
SMC1B-202ENST00000404354 CYP27A1Q02318 531 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms