RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 C8orf34Q49A92 452 aa34.84■■■■□ 3.17
USP42-202ENST00000404008 GREB1LQ9C091 1923 aaPredicted RBP34.84■■■■□ 3.17
USP42-202ENST00000404008 CYP21A2P08686 494 aa34.83■■■■□ 3.17
USP42-202ENST00000404008 FGRP09769 529 aa34.83■■■■□ 3.17
USP42-202ENST00000404008 RASA1P20936 1047 aa34.83■■■■□ 3.17
USP42-202ENST00000404008 SLC10A4Q96EP9 437 aa34.83■■■■□ 3.17
USP42-202ENST00000404008 INCENPQ9NQS7 918 aa34.83■■■■□ 3.17
USP42-202ENST00000404008 PRDM1O75626 825 aa34.82■■■■□ 3.16
USP42-202ENST00000404008 ZNF157P51786 506 aaPredicted RBP34.82■■■■□ 3.16
USP42-202ENST00000404008 NECTIN1Q15223 517 aa34.82■■■■□ 3.16
USP42-202ENST00000404008 ABCB5Q2M3G0 1257 aa34.82■■■■□ 3.16
USP42-202ENST00000404008 AKNAD1Q5T1N1 836 aa34.82■■■■□ 3.16
USP42-202ENST00000404008 STAG1Q8WVM7 1258 aa34.82■■■■□ 3.16
USP42-202ENST00000404008 PICK1Q9NRD5 415 aa34.82■■■■□ 3.16
USP42-202ENST00000404008 ZBTB4Q9P1Z0 1013 aaPredicted RBP34.82■■■■□ 3.16
USP42-202ENST00000404008 DEFB115Q30KQ5 88 aa34.81■■■■□ 3.16
USP42-202ENST00000404008 CCDC17Q96LX7 622 aa34.81■■■■□ 3.16
USP42-202ENST00000404008 GINM1Q9NU53 330 aa34.81■■■■□ 3.16
USP42-202ENST00000404008 ZBTB21Q9ULJ3 1066 aa34.81■■■■□ 3.16
USP42-202ENST00000404008 ASNSP08243 561 aa34.8■■■■□ 3.16
USP42-202ENST00000404008 PCP11498 1178 aaKnown RBP34.8■■■■□ 3.16
USP42-202ENST00000404008 RASAL3Q86YV0 1011 aa34.8■■■■□ 3.16
USP42-202ENST00000404008 RNF41Q9H4P4 317 aaPredicted RBP34.8■■■■□ 3.16
USP42-202ENST00000404008 FRMD4AQ9P2Q2 1039 aaPredicted RBP34.8■■■■□ 3.16
USP42-202ENST00000404008 SPDYE5A6NIY4 337 aa34.79■■■■□ 3.16
USP42-202ENST00000404008 ORC4O43929 436 aa34.79■■■■□ 3.16
USP42-202ENST00000404008 GH2P01242 217 aa34.79■■■■□ 3.16
USP42-202ENST00000404008 AKR1B1P15121 316 aa34.79■■■■□ 3.16
USP42-202ENST00000404008 MFSD6Q6ZSS7 791 aa34.79■■■■□ 3.16
USP42-202ENST00000404008 EPB41L2O43491 1005 aaKnown RBP34.78■■■■□ 3.16
USP42-202ENST00000404008 PTPRAP18433 802 aa34.78■■■■□ 3.16
USP42-202ENST00000404008 ERO1BQ86YB8 467 aa34.78■■■■□ 3.16
USP42-202ENST00000404008 ZNF444Q8N0Y2 327 aaPredicted RBP34.78■■■■□ 3.16
USP42-202ENST00000404008 CNKSR2Q8WXI2 1034 aa34.78■■■■□ 3.16
USP42-202ENST00000404008 OPTNQ96CV9 577 aa34.78■■■■□ 3.16
USP42-202ENST00000404008 MPHOSPH10O00566 681 aaKnown RBP34.77■■■■□ 3.16
USP42-202ENST00000404008 SLC27A2O14975 620 aa34.77■■■■□ 3.16
USP42-202ENST00000404008 SLC10A3P09131 477 aa34.77■■■■□ 3.16
USP42-202ENST00000404008 CREB3L3Q68CJ9 461 aa34.77■■■■□ 3.16
USP42-202ENST00000404008 WNK4Q96J92 1243 aa34.77■■■■□ 3.16
USP42-202ENST00000404008 CABP5Q9NP86 173 aa34.77■■■■□ 3.16
USP42-202ENST00000404008 TAF6LQ9Y6J9 622 aa34.77■■■■□ 3.16
USP42-202ENST00000404008 CEP350Q5VT06 3117 aa34.77■■■■□ 3.16
USP42-202ENST00000404008 FAM155AB1AL88 458 aaPredicted RBP34.76■■■■□ 3.16
USP42-202ENST00000404008 EIF5BO60841 1220 aaKnown RBP34.76■■■■□ 3.16
USP42-202ENST00000404008 CYP4F22Q6NT55 531 aa34.76■■■■□ 3.16
USP42-202ENST00000404008 PAXIP1Q6ZW49 1069 aaPredicted RBP34.76■■■■□ 3.16
USP42-202ENST00000404008 CCDC102AQ96A19 550 aa34.76■■■■□ 3.16
USP42-202ENST00000404008 NEDD4P46934 1319 aa34.76■■■■□ 3.16
USP42-202ENST00000404008 PPATQ06203 517 aa34.75■■■■□ 3.15
USP42-202ENST00000404008 TMEM179Q6ZVK1 233 aa34.75■■■■□ 3.15
USP42-202ENST00000404008 OTUD5Q96G74 571 aa34.75■■■■□ 3.15
USP42-202ENST00000404008 USP26Q9BXU7 913 aa34.75■■■■□ 3.15
USP42-202ENST00000404008 GUCY1A2P33402 732 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 GJA5P36382 358 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 SPRYD7Q5W111 196 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 CCDC84Q86UT8 332 aaPredicted RBP34.74■■■■□ 3.15
USP42-202ENST00000404008 TOMM22Q9NS69 142 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 PTPRFP10586 1907 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 PLIN4Q96Q06 1357 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 USP17L5A8MUK1 530 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 SEC24BO95487 1268 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 ZBTB48P10074 688 aaPredicted RBP34.74■■■■□ 3.15
USP42-202ENST00000404008 PPIL2Q13356 520 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 RAB3GAP1Q15042 981 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 RRP12Q5JTH9 1297 aaKnown RBP34.74■■■■□ 3.15
USP42-202ENST00000404008 RNF20Q5VTR2 975 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 GNL3Q9BVP2 549 aaKnown RBP eCLIP34.74■■■■□ 3.15
USP42-202ENST00000404008 ZHX2Q9Y6X8 837 aa34.74■■■■□ 3.15
USP42-202ENST00000404008 RANBP6O60518 1105 aaKnown RBP34.73■■■■□ 3.15
USP42-202ENST00000404008 SEPT2Q15019 361 aa34.73■■■■□ 3.15
USP42-202ENST00000404008 FAM47AQ5JRC9 791 aa34.73■■■■□ 3.15
USP42-202ENST00000404008 CAPNS2Q96L46 248 aa34.73■■■■□ 3.15
USP42-202ENST00000404008 E7EWF7 191 aa34.72■■■■□ 3.15
USP42-202ENST00000404008 HSPA4P34932 840 aa34.72■■■■□ 3.15
USP42-202ENST00000404008 TFAP4Q01664 338 aa34.72■■■■□ 3.15
USP42-202ENST00000404008 STOX1Q6ZVD7 989 aa34.72■■■■□ 3.15
USP42-202ENST00000404008 TBC1D2Q9BYX2 928 aa34.72■■■■□ 3.15
USP42-202ENST00000404008 CNNM2Q9H8M5 875 aa34.72■■■■□ 3.15
USP42-202ENST00000404008 THSD7BQ9C0I4 1608 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 TSPY3P0CV98 308 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 TSPY8P0CW00 308 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 ECE1P42892 770 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 NT5C2P49902 561 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 NEDD1Q8NHV4 660 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 NKX2-3Q8TAU0 364 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 AFG3L2Q9Y4W6 797 aa34.71■■■■□ 3.15
USP42-202ENST00000404008 TSPY2A6NKD2 308 aa34.7■■■■□ 3.15
USP42-202ENST00000404008 IRF6O14896 467 aa34.7■■■■□ 3.15
USP42-202ENST00000404008 GRM1Q13255 1194 aa34.7■■■■□ 3.15
USP42-202ENST00000404008 ESR2Q92731 530 aa34.7■■■■□ 3.15
USP42-202ENST00000404008 KRT23Q9C075 422 aa34.7■■■■□ 3.15
USP42-202ENST00000404008 VEGFBP49765 207 aa34.69■■■■□ 3.14
USP42-202ENST00000404008 MKRN3Q13064 507 aaKnown RBP34.69■■■■□ 3.14
USP42-202ENST00000404008 KCNB2Q92953 911 aa34.69■■■■□ 3.14
USP42-202ENST00000404008 WDR18Q9BV38 432 aa34.69■■■■□ 3.14
USP42-202ENST00000404008 AS3MTQ9HBK9 375 aa34.69■■■■□ 3.14
USP42-202ENST00000404008 WDR33Q9C0J8 1336 aaKnown RBP34.68■■■■□ 3.14
USP42-202ENST00000404008 MYH4Q9Y623 1939 aa34.68■■■■□ 3.14
USP42-202ENST00000404008 IGKV6D-41A0A0C4DH26 115 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms