RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 EDC3Q96F86 508 aaKnown RBP18.66■□□□□ 0.58
TPM1-207ENST00000403994 WDR18Q9BV38 432 aa18.66■□□□□ 0.58
TPM1-207ENST00000403994 EHD4Q9H223 541 aa18.66■□□□□ 0.58
TPM1-207ENST00000403994 BAZ2AQ9UIF9 1905 aaKnown RBP18.65■□□□□ 0.58
TPM1-207ENST00000403994 MAGEB6P1A0A0J9YX57 407 aa18.65■□□□□ 0.58
TPM1-207ENST00000403994 TCRBV5S4A2TA0A5A2 114 aa18.65■□□□□ 0.58
TPM1-207ENST00000403994 PRKCZQ05513 592 aa18.65■□□□□ 0.58
TPM1-207ENST00000403994 GINM1Q9NU53 330 aa18.65■□□□□ 0.58
TPM1-207ENST00000403994 DOCK3Q8IZD9 2030 aa18.65■□□□□ 0.58
TPM1-207ENST00000403994 ZNF532Q9HCE3 1301 aa18.65■□□□□ 0.58
TPM1-207ENST00000403994 MYCP01106 439 aaPredicted RBP18.64■□□□□ 0.57
TPM1-207ENST00000403994 EN2P19622 333 aaPredicted RBP18.64■□□□□ 0.57
TPM1-207ENST00000403994 HOXD10P28358 340 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 FAM110CQ1W6H9 321 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 ANKRD13CQ8N6S4 541 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 RAET1EQ8TD07 263 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 TMEM106CQ9BVX2 250 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 LRRCC1Q9C099 1032 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 PAG1Q9NWQ8 432 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 SERPINB13Q9UIV8 391 aa18.64■□□□□ 0.57
TPM1-207ENST00000403994 ATP5JP18859 108 aa18.63■□□□□ 0.57
TPM1-207ENST00000403994 BACE1P56817 501 aa18.63■□□□□ 0.57
TPM1-207ENST00000403994 PABPC4Q13310 644 aaKnown RBP eCLIP18.63■□□□□ 0.57
TPM1-207ENST00000403994 PRPF38BQ5VTL8 546 aaKnown RBP18.63■□□□□ 0.57
TPM1-207ENST00000403994 ASCC2Q9H1I8 757 aaPredicted RBP18.63■□□□□ 0.57
TPM1-207ENST00000403994 CEP290O15078 2479 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 GH2P01242 217 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 GRK4P32298 578 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 TATDN1Q6P1N9 297 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 LCORLQ8N3X6 602 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 HAUS7Q99871 368 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 CRNKL1Q9BZJ0 848 aaKnown RBP18.62■□□□□ 0.57
TPM1-207ENST00000403994 BOLA2Q9H3K6 86 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 GABRQQ9UN88 632 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 PLXNB2O15031 1838 aa18.62■□□□□ 0.57
TPM1-207ENST00000403994 TNPO2O14787 897 aaKnown RBP18.61■□□□□ 0.57
TPM1-207ENST00000403994 SMARCA5O60264 1052 aaPredicted RBP18.61■□□□□ 0.57
TPM1-207ENST00000403994 GCLCP48506 637 aaPredicted RBP18.61■□□□□ 0.57
TPM1-207ENST00000403994 MTFR1Q15390 333 aa18.61■□□□□ 0.57
TPM1-207ENST00000403994 TTC6Q86TZ1 520 aa18.61■□□□□ 0.57
TPM1-207ENST00000403994 TMOD4Q9NZQ9 345 aa18.61■□□□□ 0.57
TPM1-207ENST00000403994 USP17L10C9JJH3 530 aa18.6■□□□□ 0.57
TPM1-207ENST00000403994 SHMT1P34896 483 aa18.6■□□□□ 0.57
TPM1-207ENST00000403994 ADD2P35612 726 aa18.6■□□□□ 0.57
TPM1-207ENST00000403994 PLCD1P51178 756 aa18.6■□□□□ 0.57
TPM1-207ENST00000403994 IRX3P78415 501 aaPredicted RBP18.6■□□□□ 0.57
TPM1-207ENST00000403994 EVX2Q03828 476 aa18.6■□□□□ 0.57
TPM1-207ENST00000403994 SLAIN1Q8ND83 568 aa18.6■□□□□ 0.57
TPM1-207ENST00000403994 C19orf81C9J6K1 198 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 MBD4O95243 580 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 FLT3LGP49771 235 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 SLFNL1Q499Z3 407 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 SDR42E1Q8WUS8 393 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.59■□□□□ 0.57
TPM1-207ENST00000403994 ARMT1Q9H993 441 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
TPM1-207ENST00000403994 MCM9Q9NXL9 1143 aa18.59■□□□□ 0.57
TPM1-207ENST00000403994 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
TPM1-207ENST00000403994 HOXA7P31268 230 aaPredicted RBP18.58■□□□□ 0.56
TPM1-207ENST00000403994 GABPAQ06546 454 aa18.58■□□□□ 0.56
TPM1-207ENST00000403994 CERKLQ49MI3 558 aaPredicted RBP18.58■□□□□ 0.56
TPM1-207ENST00000403994 ADCY3O60266 1144 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 CHGBP05060 677 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 HERVK_113P62684 666 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 IRF5Q13568 498 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 RAB3GAP1Q15042 981 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 COA7Q96BR5 231 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 FEZ1Q99689 392 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 EMILIN3Q9NT22 766 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 MORF4L1Q9UBU8 362 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 A0A0G2JMZ2 1700 aa18.57■□□□□ 0.56
TPM1-207ENST00000403994 CYP2D6P10635 497 aa18.56■□□□□ 0.56
TPM1-207ENST00000403994 CCL5P13501 91 aa18.56■□□□□ 0.56
TPM1-207ENST00000403994 ELNP15502 786 aa18.56■□□□□ 0.56
TPM1-207ENST00000403994 RRP1P56182 461 aaKnown RBP18.56■□□□□ 0.56
TPM1-207ENST00000403994 ZYXQ15942 572 aaKnown RBP18.56■□□□□ 0.56
TPM1-207ENST00000403994 USP17L2Q6R6M4 530 aa18.56■□□□□ 0.56
TPM1-207ENST00000403994 C12orf42Q96LP6 360 aa18.56■□□□□ 0.56
TPM1-207ENST00000403994 ECHDC1Q9NTX5 307 aa18.56■□□□□ 0.56
TPM1-207ENST00000403994 BIN2Q9UBW5 565 aaPredicted RBP18.56■□□□□ 0.56
TPM1-207ENST00000403994 PRKAB2O43741 272 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 PEX10O60683 326 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 INHAP05111 366 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 GUCY1A2P33402 732 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 UBXN2AP68543 259 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 UBE3CQ15386 1083 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 TSHZ3Q63HK5 1081 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 PXYLP1Q8TE99 480 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 P2RX7Q99572 595 aaKnown RBP18.55■□□□□ 0.56
TPM1-207ENST00000403994 TXNRD2Q9NNW7 524 aa18.55■□□□□ 0.56
TPM1-207ENST00000403994 RANBP2P49792 3224 aaKnown RBP18.54■□□□□ 0.56
TPM1-207ENST00000403994 SLC44A5Q8NCS7 719 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 ACER1Q8TDN7 264 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 GPATCH3Q96I76 525 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 KIAA1683Q9H0B3 1180 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 RNF208Q9H0X6 261 aa18.54■□□□□ 0.56
TPM1-207ENST00000403994 UNC93B1Q9H1C4 597 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms