RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 C9orf50Q5SZB4 431 aa11.65□□□□□ -0.54
NUP43-204ENST00000403890 CCDC84Q86UT8 332 aaPredicted RBP11.65□□□□□ -0.54
NUP43-204ENST00000403890 IDI2Q9BXS1 227 aa11.65□□□□□ -0.54
NUP43-204ENST00000403890 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.54
NUP43-204ENST00000403890 KIF16BQ96L93 1317 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 DNAH12Q6ZR08 3092 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 MAP3K12Q12852 859 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 SH3BP5LQ7L8J4 393 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 ZNF280CQ8ND82 737 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.64□□□□□ -0.55
NUP43-204ENST00000403890 CDH23Q9H251 3354 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 PTPRFP10586 1907 aa11.64□□□□□ -0.55
NUP43-204ENST00000403890 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
NUP43-204ENST00000403890 LDHBP07195 334 aaKnown RBP11.63□□□□□ -0.55
NUP43-204ENST00000403890 SLURP2P0DP57 97 aa11.63□□□□□ -0.55
NUP43-204ENST00000403890 PRDX5P30044 214 aa11.63□□□□□ -0.55
NUP43-204ENST00000403890 HMGCS2P54868 508 aa11.63□□□□□ -0.55
NUP43-204ENST00000403890 PDE3AQ14432 1141 aa11.63□□□□□ -0.55
NUP43-204ENST00000403890 USP38Q8NB14 1042 aa11.63□□□□□ -0.55
NUP43-204ENST00000403890 GPRC5AQ8NFJ5 357 aa11.63□□□□□ -0.55
NUP43-204ENST00000403890 BDP1A6H8Y1 2624 aa11.63□□□□□ -0.55
NUP43-204ENST00000403890 FGFR2P21802 821 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 MAPK4P31152 587 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 RGS2P41220 211 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 RTP1P59025 263 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 IRX3P78415 501 aaPredicted RBP11.62□□□□□ -0.55
NUP43-204ENST00000403890 PUM3Q15397 648 aaKnown RBP11.62□□□□□ -0.55
NUP43-204ENST00000403890 CCL14Q16627 93 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 ATXN2LQ8WWM7 1075 aaKnown RBP11.62□□□□□ -0.55
NUP43-204ENST00000403890 USP6NLQ92738 828 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 KAZALD1Q96I82 304 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
NUP43-204ENST00000403890 PIEZO1Q92508 2521 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 TBC1D12O60347 775 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 ALDH1L1O75891 902 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 GRIN2CQ14957 1233 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
NUP43-204ENST00000403890 BADQ92934 168 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 P2RX7Q99572 595 aaKnown RBP11.61□□□□□ -0.55
NUP43-204ENST00000403890 OSBPL5Q9H0X9 879 aaPredicted RBP11.61□□□□□ -0.55
NUP43-204ENST00000403890 TXNRD2Q9NNW7 524 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 ATP11BQ9Y2G3 1177 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
NUP43-204ENST00000403890 PLXNB2O15031 1838 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 DNM1LO00429 736 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 MSCO60682 206 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 SLC5A1P13866 664 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 MORN1Q5T089 497 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 MFSD14CQ5VZR4 134 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 FBXO22Q8NEZ5 403 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 ADAMTS19Q8TE59 1207 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 LPAR1Q92633 364 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 ASB2Q96Q27 587 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 APBA2Q99767 749 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.6□□□□□ -0.55
NUP43-204ENST00000403890 PRDM5Q9NQX1 630 aaPredicted RBP11.6□□□□□ -0.55
NUP43-204ENST00000403890 DDX20Q9UHI6 824 aaKnown RBP11.6□□□□□ -0.55
NUP43-204ENST00000403890 PHIPQ8WWQ0 1821 aa11.6□□□□□ -0.55
NUP43-204ENST00000403890 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
NUP43-204ENST00000403890 USP17L5A8MUK1 530 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 PEX10O60683 326 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 VAMP4O75379 141 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 HOXA7P31268 230 aaPredicted RBP11.59□□□□□ -0.55
NUP43-204ENST00000403890 PICALMQ13492 652 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 RABL6Q3YEC7 729 aaPredicted RBP11.59□□□□□ -0.55
NUP43-204ENST00000403890 SLC39A5Q6ZMH5 540 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 LPIN2Q92539 896 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 SRCIN1Q9C0H9 1055 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 BICC1Q9H694 974 aaKnown RBP11.59□□□□□ -0.55
NUP43-204ENST00000403890 DDX4Q9NQI0 724 aaKnown RBP11.59□□□□□ -0.55
NUP43-204ENST00000403890 GNL3LQ9NVN8 582 aaKnown RBP11.59□□□□□ -0.55
NUP43-204ENST00000403890 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 DOCK1Q14185 1865 aa11.59□□□□□ -0.55
NUP43-204ENST00000403890 CACNA1FO60840 1977 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 FAM196BA6NMK8 535 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 NBPF7P0C2Y1 421 aaPredicted RBP11.58□□□□□ -0.56
NUP43-204ENST00000403890 CNGA1P29973 690 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 CAP2P40123 477 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 HERVK_113P62684 666 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 ERVK-9P63128 1117 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 ERVK-24P63145 666 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 MRPS5P82675 430 aaKnown RBP11.58□□□□□ -0.56
NUP43-204ENST00000403890 MAP2K5Q13163 448 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 Q3C1V9 767 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 SLC4A10Q6U841 1118 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 SLF2Q8IX21 1173 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 ARRDC4Q8NCT1 418 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 KLHDC4Q8TBB5 520 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 EDC3Q96F86 508 aaKnown RBP11.58□□□□□ -0.56
NUP43-204ENST00000403890 RNPC3Q96LT9 517 aaKnown RBP11.58□□□□□ -0.56
NUP43-204ENST00000403890 UHRF1Q96T88 793 aaPredicted RBP11.58□□□□□ -0.56
NUP43-204ENST00000403890 C1QTNF1Q9BXJ1 281 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 PORCNQ9H237 461 aa11.58□□□□□ -0.56
NUP43-204ENST00000403890 AS3MTQ9HBK9 375 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms