RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 HOXA7P31268 230 aaPredicted RBP15.09■□□□□ 0.01
PRAME-204ENST00000403441 PPP4CP60510 307 aa15.09■□□□□ 0.01
PRAME-204ENST00000403441 PDE3AQ14432 1141 aa15.09■□□□□ 0.01
PRAME-204ENST00000403441 FOXP4Q8IVH2 680 aaPredicted RBP15.09■□□□□ 0.01
PRAME-204ENST00000403441 CCAR1Q8IX12 1150 aaKnown RBP15.09■□□□□ 0.01
PRAME-204ENST00000403441 GPRC5AQ8NFJ5 357 aa15.09■□□□□ 0.01
PRAME-204ENST00000403441 DBNDD2Q9BQY9 259 aa15.09■□□□□ 0.01
PRAME-204ENST00000403441 GJD2Q9UKL4 321 aa15.09■□□□□ 0.01
PRAME-204ENST00000403441 FOCADQ5VW36 1801 aa15.08■□□□□ 0.01
PRAME-204ENST00000403441 USP17L10C9JJH3 530 aa15.08■□□□□ 0
PRAME-204ENST00000403441 HERVK_113P62684 666 aa15.08■□□□□ 0
PRAME-204ENST00000403441 ADGRA1Q86SQ6 560 aa15.08■□□□□ 0
PRAME-204ENST00000403441 METTL16Q86W50 562 aaKnown RBP15.08■□□□□ 0
PRAME-204ENST00000403441 C7orf61Q8IZ16 206 aa15.08■□□□□ 0
PRAME-204ENST00000403441 GTF3C2Q8WUA4 911 aaPredicted RBP15.08■□□□□ 0
PRAME-204ENST00000403441 TRIB2Q92519 343 aa15.08■□□□□ 0
PRAME-204ENST00000403441 ZNF512BQ96KM6 892 aaPredicted RBP15.08■□□□□ 0
PRAME-204ENST00000403441 NUDT12Q9BQG2 462 aa15.08■□□□□ 0
PRAME-204ENST00000403441 NBPF3Q9H094 633 aa15.08■□□□□ 0
PRAME-204ENST00000403441 DNAJC18Q9H819 358 aa15.08■□□□□ 0
PRAME-204ENST00000403441 SAP30BPQ9UHR5 308 aaKnown RBP15.08■□□□□ 0
PRAME-204ENST00000403441 RCAN3Q9UKA8 241 aa15.08■□□□□ 0
PRAME-204ENST00000403441 PALD1Q9ULE6 856 aa15.08■□□□□ 0
PRAME-204ENST00000403441 ZBTB21Q9ULJ3 1066 aa15.08■□□□□ 0
PRAME-204ENST00000403441 SURF6O75683 361 aaKnown RBP15.07■□□□□ 0
PRAME-204ENST00000403441 GDF11O95390 407 aa15.07■□□□□ 0
PRAME-204ENST00000403441 CYP2E1P05181 493 aaPredicted RBP15.07■□□□□ 0
PRAME-204ENST00000403441 MAPK4P31152 587 aa15.07■□□□□ 0
PRAME-204ENST00000403441 POLA2Q14181 598 aa15.07■□□□□ 0
PRAME-204ENST00000403441 CERS3Q8IU89 383 aa15.07■□□□□ 0
PRAME-204ENST00000403441 TRMT44Q8IYL2 757 aaKnown RBP15.07■□□□□ 0
PRAME-204ENST00000403441 SSH3Q8TE77 659 aa15.07■□□□□ 0
PRAME-204ENST00000403441 P2RX7Q99572 595 aaKnown RBP15.07■□□□□ 0
PRAME-204ENST00000403441 STAP2Q9UGK3 403 aa15.07■□□□□ 0
PRAME-204ENST00000403441 CDK5RAP2Q96SN8 1893 aa15.07■□□□□ 0
PRAME-204ENST00000403441 LAMA3Q16787 3333 aa15.07■□□□□ 0
PRAME-204ENST00000403441 XRCC5P13010 732 aaKnown RBP15.06■□□□□ 0
PRAME-204ENST00000403441 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
PRAME-204ENST00000403441 ZKSCAN1P17029 563 aaPredicted RBP15.06■□□□□ 0
PRAME-204ENST00000403441 CYP2B6P20813 491 aa15.06■□□□□ 0
PRAME-204ENST00000403441 ZAP70P43403 619 aa15.06■□□□□ 0
PRAME-204ENST00000403441 TRIM32Q13049 653 aa15.06■□□□□ 0
PRAME-204ENST00000403441 FTSJ3Q8IY81 847 aaKnown RBP15.06■□□□□ 0
PRAME-204ENST00000403441 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
PRAME-204ENST00000403441 C11orf49Q9H6J7 331 aa15.06■□□□□ 0
PRAME-204ENST00000403441 CWC22Q9HCG8 908 aaKnown RBP15.06■□□□□ 0
PRAME-204ENST00000403441 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
PRAME-204ENST00000403441 DDX60LQ5H9U9 1706 aaKnown RBP15.06■□□□□ 0
PRAME-204ENST00000403441 ALPK3Q96L96 1907 aa15.05■□□□□ 0
PRAME-204ENST00000403441 IDH1O75874 414 aaKnown RBP15.05■□□□□ -0
PRAME-204ENST00000403441 MS4A1P11836 297 aa15.05■□□□□ -0
PRAME-204ENST00000403441 CYP7A1P22680 504 aa15.05■□□□□ -0
PRAME-204ENST00000403441 ERVK-9P63128 1117 aa15.05■□□□□ -0
PRAME-204ENST00000403441 ERVK-24P63145 666 aa15.05■□□□□ -0
PRAME-204ENST00000403441 JAG1P78504 1218 aa15.05■□□□□ -0
PRAME-204ENST00000403441 ATP8B2P98198 1209 aa15.05■□□□□ -0
PRAME-204ENST00000403441 USP17L2Q6R6M4 530 aa15.05■□□□□ -0
PRAME-204ENST00000403441 FEZ1Q99689 392 aa15.05■□□□□ -0
PRAME-204ENST00000403441 PAGR1Q9BTK6 254 aa15.05■□□□□ -0
PRAME-204ENST00000403441 PIH1D3Q9NQM4 214 aaKnown RBP15.05■□□□□ -0
PRAME-204ENST00000403441 OGDHLQ9ULD0 1010 aa15.05■□□□□ -0
PRAME-204ENST00000403441 PLXNB2O15031 1838 aa15.05■□□□□ -0
PRAME-204ENST00000403441 GH2P01242 217 aa15.04■□□□□ -0
PRAME-204ENST00000403441 RGS2P41220 211 aa15.04■□□□□ -0
PRAME-204ENST00000403441 USP5P45974 858 aa15.04■□□□□ -0
PRAME-204ENST00000403441 SHROOM1Q2M3G4 852 aaPredicted RBP15.04■□□□□ -0
PRAME-204ENST00000403441 MAP3K21Q5TCX8 1036 aa15.04■□□□□ -0
PRAME-204ENST00000403441 PANK1Q8TE04 598 aa15.04■□□□□ -0
PRAME-204ENST00000403441 APBA2Q99767 749 aa15.04■□□□□ -0
PRAME-204ENST00000403441 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
PRAME-204ENST00000403441 DBNLQ9UJU6 430 aaKnown RBP15.04■□□□□ -0
PRAME-204ENST00000403441 ZMYND8Q9ULU4 1186 aaPredicted RBP15.04■□□□□ -0
PRAME-204ENST00000403441 SOX1O00570 391 aaPredicted RBP15.03■□□□□ -0
PRAME-204ENST00000403441 PEX10O60683 326 aa15.03■□□□□ -0
PRAME-204ENST00000403441 BMP8BP34820 402 aa15.03■□□□□ -0
PRAME-204ENST00000403441 DYNLL1P63167 89 aaKnown RBP15.03■□□□□ -0
PRAME-204ENST00000403441 CCNA1P78396 465 aa15.03■□□□□ -0
PRAME-204ENST00000403441 TMED8Q6PL24 325 aaPredicted RBP15.03■□□□□ -0
PRAME-204ENST00000403441 GPR142Q7Z601 462 aa15.03■□□□□ -0
PRAME-204ENST00000403441 PLEKHH3Q7Z736 793 aa15.03■□□□□ -0
PRAME-204ENST00000403441 ITPRIPQ8IWB1 547 aa15.03■□□□□ -0
PRAME-204ENST00000403441 GDF15Q99988 308 aa15.03■□□□□ -0
PRAME-204ENST00000403441 C1orf115Q9H7X2 142 aa15.03■□□□□ -0
PRAME-204ENST00000403441 EMILIN3Q9NT22 766 aa15.03■□□□□ -0
PRAME-204ENST00000403441 SERPINB13Q9UIV8 391 aa15.03■□□□□ -0
PRAME-204ENST00000403441 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
PRAME-204ENST00000403441 GLRX3O76003 335 aaKnown RBP15.02■□□□□ -0
PRAME-204ENST00000403441 USP14P54578 494 aa15.02■□□□□ -0
PRAME-204ENST00000403441 ZYXQ15942 572 aaKnown RBP15.02■□□□□ -0
PRAME-204ENST00000403441 MIGA1Q8NAN2 632 aa15.02■□□□□ -0
PRAME-204ENST00000403441 LRCH3Q96II8 777 aa15.02■□□□□ -0
PRAME-204ENST00000403441 EHD4Q9H223 541 aa15.02■□□□□ -0
PRAME-204ENST00000403441 PORCNQ9H237 461 aa15.02■□□□□ -0
PRAME-204ENST00000403441 TLR7Q9NYK1 1049 aaKnown RBP15.02■□□□□ -0
PRAME-204ENST00000403441 MYO5AQ9Y4I1 1855 aaKnown RBP15.01□□□□□ -0.01
PRAME-204ENST00000403441 USP17L15C9J2P7 530 aa15.01□□□□□ -0.01
PRAME-204ENST00000403441 USP17L13C9JLJ4 530 aa15.01□□□□□ -0.01
PRAME-204ENST00000403441 USP17L11C9JVI0 530 aa15.01□□□□□ -0.01
PRAME-204ENST00000403441 USP17L18D6R9N7 530 aa15.01□□□□□ -0.01
PRAME-204ENST00000403441 USP17L22D6RA61 530 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms