RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 CATIPQ7Z7H3 387 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 ABCC12Q96J65 1359 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 PPP1R13BQ96KQ4 1090 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
SCFD2-202ENST00000401642 GSDMDP57764 484 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 RBM6P78332 1123 aaKnown RBP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 MTERF4Q7Z6M4 381 aaKnown RBP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 TXNRD3Q86VQ6 643 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 ZFP91Q96JP5 570 aaPredicted RBP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 MAN1B1Q9UKM7 699 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 DEXIO95424 95 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 GTF2F1P35269 517 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 KARSQ15046 597 aaKnown RBP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 ERCC6LQ2NKX8 1250 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 FBXL16Q8N461 479 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 WASF1Q92558 559 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 MINPP1Q9UNW1 487 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 PAXBP1Q9Y5B6 917 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 TSPY2A6NKD2 308 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 ADAMTS3O15072 1205 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 PIK3AP1Q6ZUJ8 805 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 IQCA1Q86XH1 822 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 ZSCAN10Q96SZ4 725 aaPredicted RBP12.69□□□□□ -0.38
SCFD2-202ENST00000401642 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
SCFD2-202ENST00000401642 GNPATO15228 680 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 PPP6R2O75170 966 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 NLRP5P59047 1200 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 LINC00116Q8NCU8 138 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 STAG1Q8WVM7 1258 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 SHISA4Q96DD7 197 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 FAM84BQ96KN1 310 aaPredicted RBP12.68□□□□□ -0.38
SCFD2-202ENST00000401642 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 ANKIB1Q9P2G1 1089 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 SAP30BPQ9UHR5 308 aaKnown RBP12.68□□□□□ -0.38
SCFD2-202ENST00000401642 LAMB4A4D0S4 1761 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 NUP188Q5SRE5 1749 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 TRIM75PA6NK02 468 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 NEMFO60524 1076 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 USP17L8P0C7I0 530 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 DMTNQ08495 405 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 ZNF512BQ96KM6 892 aaPredicted RBP12.68□□□□□ -0.38
SCFD2-202ENST00000401642 ZNF652Q9Y2D9 606 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 LMTK3Q96Q04 1460 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 EP400Q96L91 3159 aa12.68□□□□□ -0.38
SCFD2-202ENST00000401642 PARP4Q9UKK3 1724 aaKnown RBP12.67□□□□□ -0.38
SCFD2-202ENST00000401642 TULP1O00294 542 aaPredicted RBP12.67□□□□□ -0.38
SCFD2-202ENST00000401642 MECOMQ03112 1051 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 RASGRP2Q7LDG7 609 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 GPIHBP1Q8IV16 184 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 FBXO2Q9UK22 296 aaPredicted RBP12.67□□□□□ -0.38
SCFD2-202ENST00000401642 HPSEQ9Y251 543 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 TOGARAM1Q9Y4F4 1720 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 A0A087X0B3 334 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 GNAT2P19087 354 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 CCT6AP40227 531 aaKnown RBP12.67□□□□□ -0.38
SCFD2-202ENST00000401642 DHX8Q14562 1220 aaKnown RBP12.67□□□□□ -0.38
SCFD2-202ENST00000401642 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 SYMPKQ92797 1274 aaKnown RBP12.67□□□□□ -0.38
SCFD2-202ENST00000401642 ALX1Q15699 326 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 RILPL1Q5EBL4 403 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 DZIP1Q86YF9 867 aaKnown RBP12.67□□□□□ -0.38
SCFD2-202ENST00000401642 SLC44A5Q8NCS7 719 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 ZNF384Q8TF68 577 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 UIMC1Q96RL1 719 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 VAT1LQ9HCJ6 419 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 STX8Q9UNK0 236 aa12.67□□□□□ -0.38
SCFD2-202ENST00000401642 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
SCFD2-202ENST00000401642 XBP1P17861 261 aa12.66□□□□□ -0.38
SCFD2-202ENST00000401642 MTF1Q14872 753 aa12.66□□□□□ -0.38
SCFD2-202ENST00000401642 CCDC150Q8NCX0 1101 aa12.66□□□□□ -0.38
SCFD2-202ENST00000401642 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
SCFD2-202ENST00000401642 IRX2Q9BZI1 471 aaPredicted RBP12.66□□□□□ -0.38
SCFD2-202ENST00000401642 HOOK1Q9UJC3 728 aaKnown RBP12.66□□□□□ -0.38
SCFD2-202ENST00000401642 KRT2P35908 639 aa12.66□□□□□ -0.38
SCFD2-202ENST00000401642 CTR9Q6PD62 1173 aa12.66□□□□□ -0.38
SCFD2-202ENST00000401642 SETDB2Q96T68 719 aa12.66□□□□□ -0.38
SCFD2-202ENST00000401642 TEX33O43247 280 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 PTPREP23469 700 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 USP5P45974 858 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 RPS8P62241 208 aaKnown RBP12.65□□□□□ -0.38
SCFD2-202ENST00000401642 PTGDRQ13258 359 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 NYAP1Q6ZVC0 841 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 LZTFL1Q9NQ48 299 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 TUBE1Q9UJT0 475 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 AKAP11Q9UKA4 1901 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 SLIT2O94813 1529 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 CTIFO43310 598 aaKnown RBP12.65□□□□□ -0.38
SCFD2-202ENST00000401642 ZPR1O75312 459 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 GNG11P61952 73 aa12.65□□□□□ -0.38
SCFD2-202ENST00000401642 NLRP3Q96P20 1036 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms