RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 EPB41L2O43491 1005 aaKnown RBP18.92■□□□□ 0.62
HMGA1-204ENST00000401473 GDF11O95390 407 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 IREB2P48200 963 aaKnown RBP18.92■□□□□ 0.62
HMGA1-204ENST00000401473 PDE4BQ07343 736 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 STOX1Q6ZVD7 989 aa18.92■□□□□ 0.62
HMGA1-204ENST00000401473 OTOFQ9HC10 1997 aa18.91■□□□□ 0.62
HMGA1-204ENST00000401473 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
HMGA1-204ENST00000401473 SLC3A2P08195 630 aaKnown RBP18.91■□□□□ 0.62
HMGA1-204ENST00000401473 VGLL4Q14135 290 aa18.91■□□□□ 0.62
HMGA1-204ENST00000401473 MFSD6Q6ZSS7 791 aa18.91■□□□□ 0.62
HMGA1-204ENST00000401473 E7EWF7 191 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 AKR1B1P15121 316 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 ANKRD13AQ8IZ07 590 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 KCNB2Q92953 911 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
HMGA1-204ENST00000401473 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 NEDD4P46934 1319 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 RASSF10A6NK89 507 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 ORC4O43929 436 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 FAM47AQ5JRC9 791 aa18.9■□□□□ 0.62
HMGA1-204ENST00000401473 ZNF444Q8N0Y2 327 aaPredicted RBP18.9■□□□□ 0.62
HMGA1-204ENST00000401473 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.9■□□□□ 0.62
HMGA1-204ENST00000401473 GH2P01242 217 aa18.89■□□□□ 0.61
HMGA1-204ENST00000401473 GUCY1A2P33402 732 aa18.89■□□□□ 0.61
HMGA1-204ENST00000401473 ADCK5Q3MIX3 580 aa18.89■□□□□ 0.61
HMGA1-204ENST00000401473 TSGA10IPQ3SY00 556 aa18.89■□□□□ 0.61
HMGA1-204ENST00000401473 RRP12Q5JTH9 1297 aaKnown RBP18.89■□□□□ 0.61
HMGA1-204ENST00000401473 CCDC84Q86UT8 332 aaPredicted RBP18.89■□□□□ 0.61
HMGA1-204ENST00000401473 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
HMGA1-204ENST00000401473 SNCAIPQ9Y6H5 919 aa18.89■□□□□ 0.61
HMGA1-204ENST00000401473 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 ZNF287Q9HBT7 754 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 TOMM22Q9NS69 142 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 ATAD5Q96QE3 1844 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 B4E1Z4 1266 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 RANBP6O60518 1105 aaKnown RBP18.88■□□□□ 0.61
HMGA1-204ENST00000401473 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
HMGA1-204ENST00000401473 TFAP4Q01664 338 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 DEFB115Q30KQ5 88 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 NOL9Q5SY16 702 aaKnown RBP18.88■□□□□ 0.61
HMGA1-204ENST00000401473 RNF20Q5VTR2 975 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 SCYL3Q8IZE3 742 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 HHIPL1Q96JK4 782 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 CCDC17Q96LX7 622 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 RNF41Q9H4P4 317 aaPredicted RBP18.88■□□□□ 0.61
HMGA1-204ENST00000401473 ZSWIM5Q9P217 1185 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 SNX14Q9Y5W7 946 aa18.88■□□□□ 0.61
HMGA1-204ENST00000401473 PTPRAP18433 802 aa18.87■□□□□ 0.61
HMGA1-204ENST00000401473 CYP4F22Q6NT55 531 aa18.87■□□□□ 0.61
HMGA1-204ENST00000401473 RGMBQ6NW40 437 aa18.87■□□□□ 0.61
HMGA1-204ENST00000401473 DNAJC5GQ8N7S2 189 aa18.87■□□□□ 0.61
HMGA1-204ENST00000401473 ELP3Q9H9T3 547 aa18.87■□□□□ 0.61
HMGA1-204ENST00000401473 ZBTB21Q9ULJ3 1066 aa18.87■□□□□ 0.61
HMGA1-204ENST00000401473 UNCXA6NJT0 531 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 MPHOSPH10O00566 681 aaKnown RBP18.86■□□□□ 0.61
HMGA1-204ENST00000401473 ASNSP08243 561 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 ZNF157P51786 506 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-204ENST00000401473 SEPT2Q15019 361 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 SIAH1Q8IUQ4 282 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 SLC10A4Q96EP9 437 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 IL17RBQ9NRM6 502 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 CSADQ9Y600 493 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 FAM155AB1AL88 458 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-204ENST00000401473 NMT2O60551 498 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 KDM4AO75164 1064 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
HMGA1-204ENST00000401473 RAB3GAP1Q15042 981 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 CLEC10AQ8IUN9 316 aa18.86■□□□□ 0.61
HMGA1-204ENST00000401473 DOCK1Q14185 1865 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 TSPY2A6NKD2 308 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 EIF5BO60841 1220 aaKnown RBP18.85■□□□□ 0.61
HMGA1-204ENST00000401473 TSPY3P0CV98 308 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 TSPY8P0CW00 308 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 CYB5R4Q7L1T6 521 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 NEDD1Q8NHV4 660 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 CNNM2Q9H8M5 875 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 CABP5Q9NP86 173 aa18.85■□□□□ 0.61
HMGA1-204ENST00000401473 GREB1LQ9C091 1923 aaPredicted RBP18.84■□□□□ 0.61
HMGA1-204ENST00000401473 GJA5P36382 358 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 VEGFBP49765 207 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 GRM1Q13255 1194 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 TMEM179Q6ZVK1 233 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 PAXIP1Q6ZW49 1069 aaPredicted RBP18.84■□□□□ 0.61
HMGA1-204ENST00000401473 CHST3Q7LGC8 479 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 NCOA7Q8NI08 942 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 ESR2Q92731 530 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 ZIC5Q96T25 663 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 KRT23Q9C075 422 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 PICK1Q9NRD5 415 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 ZHX2Q9Y6X8 837 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 PHIPQ8WWQ0 1821 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 IGKV6D-41A0A0C4DH26 115 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 TRDNQ13061 729 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 RASAL3Q86YV0 1011 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 OPTNQ96CV9 577 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 CAPNS2Q96L46 248 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 ZKSCAN3Q9BRR0 538 aa18.84■□□□□ 0.61
HMGA1-204ENST00000401473 IRF6O14896 467 aa18.83■□□□□ 0.6
HMGA1-204ENST00000401473 MKRN3Q13064 507 aaKnown RBP18.83■□□□□ 0.6
HMGA1-204ENST00000401473 ERO1BQ86YB8 467 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms