RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 TRIM34Q9BYJ4 488 aa23.93■■□□□ 1.42
CTCF-202ENST00000401394 NAPBQ9H115 298 aa23.93■■□□□ 1.42
CTCF-202ENST00000401394 ADGRG1Q9Y653 693 aa23.93■■□□□ 1.42
CTCF-202ENST00000401394 SARSP49591 514 aaKnown RBP23.93■■□□□ 1.42
CTCF-202ENST00000401394 VPS18Q9P253 973 aa23.93■■□□□ 1.42
CTCF-202ENST00000401394 TCRBV5S4A2TA0A5A2 114 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 CHMP4BP1P59074 171 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 SRRTQ9BXP5 876 aaKnown RBP23.92■■□□□ 1.42
CTCF-202ENST00000401394 TJP1Q07157 1748 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 KAT6BQ8WYB5 2073 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 GLI3P10071 1580 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 PLCD3Q8N3E9 789 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 LCORLQ8N3X6 602 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 C1orf167Q5SNV9 1468 aa23.92■■□□□ 1.42
CTCF-202ENST00000401394 SLC35F6Q8N357 371 aa23.91■■□□□ 1.42
CTCF-202ENST00000401394 CYP2D7A0A087X1C5 515 aa23.91■■□□□ 1.42
CTCF-202ENST00000401394 AKR1B15C9JRZ8 316 aaPredicted RBP23.91■■□□□ 1.42
CTCF-202ENST00000401394 FMNL1O95466 1100 aaPredicted RBP23.91■■□□□ 1.42
CTCF-202ENST00000401394 ENOX1Q8TC92 643 aaKnown RBP23.91■■□□□ 1.42
CTCF-202ENST00000401394 GOLGA1Q92805 767 aa23.91■■□□□ 1.42
CTCF-202ENST00000401394 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
CTCF-202ENST00000401394 ABCB6Q9NP58 842 aa23.91■■□□□ 1.42
CTCF-202ENST00000401394 SDR42E1Q8WUS8 393 aa23.91■■□□□ 1.42
CTCF-202ENST00000401394 TULP2O00295 520 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 TXLNAP40222 546 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 ZSCAN26Q16670 478 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 GPIHBP1Q8IV16 184 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 NOA1Q8NC60 698 aaKnown RBP23.9■■□□□ 1.42
CTCF-202ENST00000401394 RGS22Q8NE09 1264 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 ATG3Q9NT62 314 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 ZNF174Q15697 407 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 NCAPH2Q6IBW4 605 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 VPS16Q9H269 839 aa23.9■■□□□ 1.42
CTCF-202ENST00000401394 MINDY4BA8MYZ0 360 aa23.89■■□□□ 1.42
CTCF-202ENST00000401394 CSF1RP07333 972 aa23.89■■□□□ 1.42
CTCF-202ENST00000401394 CCDC175P0C221 793 aa23.89■■□□□ 1.42
CTCF-202ENST00000401394 VEGFAP15692 232 aaPredicted RBP23.89■■□□□ 1.42
CTCF-202ENST00000401394 RTN1Q16799 776 aa23.89■■□□□ 1.42
CTCF-202ENST00000401394 KIF4BQ2VIQ3 1234 aa23.89■■□□□ 1.42
CTCF-202ENST00000401394 C10orf67Q8IYJ2 551 aa23.89■■□□□ 1.42
CTCF-202ENST00000401394 TBC1D2BQ9UPU7 963 aa23.89■■□□□ 1.42
CTCF-202ENST00000401394 GSG1L2A8MUP6 293 aa23.89■■□□□ 1.41
CTCF-202ENST00000401394 RASGRF1Q13972 1273 aa23.89■■□□□ 1.41
CTCF-202ENST00000401394 NUTM2AQ8IVF1 878 aaPredicted RBP23.89■■□□□ 1.41
CTCF-202ENST00000401394 FEZ2Q9UHY8 353 aaPredicted RBP23.89■■□□□ 1.41
CTCF-202ENST00000401394 ENC1O14682 589 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 VSNL1P62760 191 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 RABGGTAQ92696 567 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 A0A1B0GTH6 734 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 GYPCP04921 128 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 VGLL2Q8N8G2 317 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 ZBTB38Q8NAP3 1195 aaPredicted RBP23.88■■□□□ 1.41
CTCF-202ENST00000401394 SYMPKQ92797 1274 aaKnown RBP23.88■■□□□ 1.41
CTCF-202ENST00000401394 CAMTA1Q9Y6Y1 1673 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 TDO2P48775 406 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 ERVK-24P63145 666 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 SGMS1Q86VZ5 419 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 FCHSD1Q86WN1 690 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 MLKLQ8NB16 471 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 HDAC6Q9UBN7 1215 aa23.88■■□□□ 1.41
CTCF-202ENST00000401394 ZMYND10O75800 440 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 SAFBQ15424 915 aaKnown RBP eCLIP23.87■■□□□ 1.41
CTCF-202ENST00000401394 SLC4A8Q2Y0W8 1093 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 TMEM87BQ96K49 555 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 CTNND2Q9UQB3 1225 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 IFNAR1P17181 557 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 PLCD1P51178 756 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 MFSD6Q6ZSS7 791 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.87■■□□□ 1.41
CTCF-202ENST00000401394 CRACR2BQ8N4Y2 399 aaPredicted RBP23.87■■□□□ 1.41
CTCF-202ENST00000401394 SLF1Q9BQI6 1058 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 FAN1Q9Y2M0 1017 aa23.87■■□□□ 1.41
CTCF-202ENST00000401394 IRS4O14654 1257 aaPredicted RBP23.86■■□□□ 1.41
CTCF-202ENST00000401394 PDE8BO95263 885 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 PCCAP05165 728 aaPredicted RBP23.86■■□□□ 1.41
CTCF-202ENST00000401394 BCAMP50895 628 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 BEND6Q5SZJ8 279 aaPredicted RBP23.86■■□□□ 1.41
CTCF-202ENST00000401394 TRMT112Q9UI30 125 aaKnown RBP23.86■■□□□ 1.41
CTCF-202ENST00000401394 TUBB4AP04350 444 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 ADGRA1Q86SQ6 560 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 PPFIBP1Q86W92 1011 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 PAGE5Q96GU1 130 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 CHP1Q99653 195 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 SLC4A4Q9Y6R1 1079 aa23.86■■□□□ 1.41
CTCF-202ENST00000401394 WTAPQ15007 396 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 AKNAD1Q5T1N1 836 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 SRGAP1Q7Z6B7 1085 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 TAB2Q9NYJ8 693 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 SRGAP2O75044 1071 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 PLEKHA8P1O95397 391 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 NT5DC1Q5TFE4 455 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 NLRP10Q86W26 655 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 ADD3Q9UEY8 706 aaKnown RBP23.85■■□□□ 1.41
CTCF-202ENST00000401394 PATL2C9JE40 543 aaKnown RBP23.85■■□□□ 1.41
CTCF-202ENST00000401394 UBE3CQ15386 1083 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 PRDM11Q9NQV5 511 aa23.85■■□□□ 1.41
CTCF-202ENST00000401394 SRPRBQ9Y5M8 271 aaKnown RBP23.85■■□□□ 1.41
CTCF-202ENST00000401394 SYNRGQ9UMZ2 1314 aa23.84■■□□□ 1.41
CTCF-202ENST00000401394 ANKRD18BA2A2Z9 1011 aa23.84■■□□□ 1.41
CTCF-202ENST00000401394 CTSWP56202 376 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms