RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 UPF3BQ9BZI7 483 aaKnown RBP6.53□□□□□ -1.36
SAMSN1-203ENST00000400566 ARPP21Q9UBL0 812 aaPredicted RBP6.53□□□□□ -1.36
SAMSN1-203ENST00000400566 USP17L12C9JPN9 530 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 USP17L21D6R901 530 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 E7EWF7 191 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 WDHD1O75717 1129 aaPredicted RBP6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 USP17L8P0C7I0 530 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 PCP11498 1178 aaKnown RBP6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 CASTP20810 708 aaKnown RBP6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 MCM2P49736 904 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 HAND2P61296 217 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 PPARAQ07869 468 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 BECN1Q14457 450 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 CDC42EP5Q6NZY7 148 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 CTR9Q6PD62 1173 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 BLOC1S2Q6QNY1 142 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 TBC1D10CQ8IV04 446 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 OGFOD1Q8N543 542 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 MTMR14Q8NCE2 650 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 DPF2Q92785 391 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 TTC14Q96N46 770 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 TBC1D2Q9BYX2 928 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 HDAC9Q9UKV0 1011 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 CYP46A1Q9Y6A2 500 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 ROBO3Q96MS0 1386 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 FLT1P17948 1338 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 ZNF541Q9H0D2 1346 aa6.52□□□□□ -1.37
SAMSN1-203ENST00000400566 CD2BP2O95400 341 aaKnown RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 FGRP09769 529 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 RPS6KB1P23443 525 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 USP5P45974 858 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 ZNF280AP59817 542 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 COL9A3Q14050 684 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 CFAP100Q494V2 611 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 AKNAD1Q5T1N1 836 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 HSCBQ8IWL3 235 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 NCOA7Q8NI08 942 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 STAG1Q8WVM7 1258 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 ZBED3Q96IU2 234 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 IDI2Q9BXS1 227 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 ALDH8A1Q9H2A2 487 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 RNF41Q9H4P4 317 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 CNNM2Q9H8M5 875 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 CDHR5Q9HBB8 845 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 USP40Q9NVE5 1235 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 MCM9Q9NXL9 1143 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 MYH8P13535 1937 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 WDR19Q8NEZ3 1342 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 GPR37O15354 613 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 GRIN3BO60391 1043 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 CPA1P15085 419 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 NT5C2P49902 561 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 RBM5P52756 815 aaKnown RBP eCLIP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 EXOSC10Q01780 885 aaKnown RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 TRDNQ13061 729 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 DLGAP5Q15398 846 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 C12orf60Q5U649 245 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 DHX32Q7L7V1 743 aaKnown RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 KRTAP1-3Q8IUG1 177 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 MAPKAPK5Q8IW41 473 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 MB21D2Q8IYB1 491 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 GPC2Q8N158 579 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 FBXL16Q8N461 479 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 PRMT6Q96LA8 375 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 AGXT2Q9BYV1 514 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 PCDHAC2Q9Y5I4 1007 aa6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 COL2A1P02458 1487 aaPredicted RBP6.51□□□□□ -1.37
SAMSN1-203ENST00000400566 NEDD4P46934 1319 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 ZC3H4Q9UPT8 1303 aaKnown RBP6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 MINDY4BA8MYZ0 360 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 TULP1O00294 542 aaPredicted RBP6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 MAP3K7O43318 606 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 ORC4O43929 436 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 GMPSP49915 693 aaPredicted RBP6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 CTDSPL2Q05D32 466 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 GPR162Q16538 588 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 C6orf132Q5T0Z8 1188 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 FKBP1CQ5VVH2 108 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 MFSD6Q6ZSS7 791 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 RALYLQ86SE5 291 aaKnown RBP6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 AMOTL1Q8IY63 956 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 KRT23Q9C075 422 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 DDX4Q9NQI0 724 aaKnown RBP6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 PDRG1Q9NUG6 133 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 RNF181Q9P0P0 153 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 TACC3Q9Y6A5 838 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 SIPA1L1O43166 1804 aa6.5□□□□□ -1.37
SAMSN1-203ENST00000400566 ATRNL1Q5VV63 1379 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 CYP2D7A0A087X1C5 515 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 SMIM22K7EJ46 135 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 WNT10BO00744 389 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 ENTPD3O75355 529 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 SLC3A2P08195 630 aaKnown RBP6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 CYP2D6P10635 497 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 MCM5P33992 734 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 AK2P54819 239 aa6.49□□□□□ -1.37
SAMSN1-203ENST00000400566 NFIAQ12857 509 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms