RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 HID1Q8IV36 788 aa7.56□□□□□ -1.2
SAMSN1-202ENST00000400564 XAGE3Q8WTP9 111 aa7.56□□□□□ -1.2
SAMSN1-202ENST00000400564 TJP2Q9UDY2 1190 aa7.56□□□□□ -1.2
SAMSN1-202ENST00000400564 PCDHGB7Q9Y5F8 929 aa7.56□□□□□ -1.2
SAMSN1-202ENST00000400564 LRIG2O94898 1065 aa7.55□□□□□ -1.2
SAMSN1-202ENST00000400564 SLITRK5O94991 958 aa7.55□□□□□ -1.2
SAMSN1-202ENST00000400564 PRAMEF13Q5VWM6 474 aa7.55□□□□□ -1.2
SAMSN1-202ENST00000400564 FAM196AQ6ZSG2 479 aa7.55□□□□□ -1.2
SAMSN1-202ENST00000400564 ZNF296Q8WUU4 475 aaPredicted RBP7.55□□□□□ -1.2
SAMSN1-202ENST00000400564 FOXQ1Q9C009 403 aa7.55□□□□□ -1.2
SAMSN1-202ENST00000400564 GREM1O60565 184 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 PLCG1P19174 1290 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 CRKP46108 304 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 FZD5Q13467 585 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 MPP2Q14168 576 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 REC114Q7Z4M0 266 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 DTX1Q86Y01 620 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 RIN3Q8TB24 985 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 HEXIM2Q96MH2 286 aaKnown RBP7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 MIPEPQ99797 713 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 KCNQ5Q9NR82 932 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 UBP1Q9NZI7 540 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 SUPT16HQ9Y5B9 1047 aaKnown RBP7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
SAMSN1-202ENST00000400564 CNTNAP4Q9C0A0 1308 aa7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 EOMESO95936 686 aa7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 PDE4BQ07343 736 aa7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 FAM214BQ7L5A3 538 aa7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 USP48Q86UV5 1035 aa7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 RNF34Q969K3 372 aa7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 TMEM87BQ96K49 555 aa7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 METTL5Q9NRN9 209 aaKnown RBP7.53□□□□□ -1.2
SAMSN1-202ENST00000400564 UPK3BL1B0FP48 263 aa7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 UPK3BL2E5RIL1 263 aa7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 CST3P01034 146 aaPredicted RBP7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 CAP2P40123 477 aa7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 C9orf131Q5VYM1 1079 aa7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 MRPL41Q8IXM3 137 aaKnown RBP7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 PLD6Q8N2A8 252 aaKnown RBP7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 RNF114Q9Y508 228 aa7.52□□□□□ -1.21
SAMSN1-202ENST00000400564 OXCT1P55809 520 aa7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 RACK1P63244 317 aaKnown RBP7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 DIEXFQ68CQ4 756 aaKnown RBP7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 METTL16Q86W50 562 aaKnown RBP7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 MCATQ8IVS2 390 aaKnown RBP7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 EAF1Q96JC9 268 aaPredicted RBP7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 BRMS1Q9HCU9 246 aa7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 REV1Q9UBZ9 1251 aa7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 ADAM30Q9UKF2 790 aa7.51□□□□□ -1.21
SAMSN1-202ENST00000400564 DNAJA2O60884 412 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 HTR3BO95264 441 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 ITIH2P19823 946 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 HDLBPQ00341 1268 aaKnown RBP7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 SEZ6Q53EL9 994 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 LETMD1Q6P1Q0 360 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 MFSD2AQ8NA29 543 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 SPON2Q9BUD6 331 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 LRRC3Q9BY71 257 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 PRR36Q9H6K5 1346 aa7.5□□□□□ -1.21
SAMSN1-202ENST00000400564 CWF19L2Q2TBE0 894 aaKnown RBP7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 NFXL1Q6ZNB6 911 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 ARHGAP27Q6ZUM4 889 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 CDH24Q86UP0 819 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 KIAA0825Q8IV33 1275 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 FAM13CQ8NE31 585 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 CCDC39Q9UFE4 941 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 KLHL3Q9UH77 587 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 TPX2Q9ULW0 747 aaKnown RBP7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 PLAGL2Q9UPG8 496 aa7.49□□□□□ -1.21
SAMSN1-202ENST00000400564 PRR33A8MZF0 331 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 CHURC1-FNTBB4DL54 471 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 CEACAM5P06731 702 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 TAL1P17542 331 aaPredicted RBP7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 APOBRQ0VD83 1088 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 TMEM201Q5SNT2 666 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 NETO1Q8TDF5 533 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 PRDM5Q9NQX1 630 aaPredicted RBP7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 PCDHB14Q9Y5E9 798 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 ROBO2Q9HCK4 1378 aa7.48□□□□□ -1.21
SAMSN1-202ENST00000400564 NT5C1AQ9BXI3 368 aa7.47□□□□□ -1.21
SAMSN1-202ENST00000400564 BSDC1Q9NW68 430 aaPredicted RBP7.47□□□□□ -1.21
SAMSN1-202ENST00000400564 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
SAMSN1-202ENST00000400564 IGF2BP3O00425 579 aaKnown RBP eCLIP7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 PRNPP04156 253 aa7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 CD96P40200 585 aa7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 CLCQ05315 142 aa7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 BNIP3Q12983 259 aa7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 ZNF574Q6ZN55 896 aaPredicted RBP7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 GK5Q6ZS86 529 aa7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 NT5DC4Q86YG4 428 aa7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 NKD1Q969G9 470 aa7.46□□□□□ -1.21
SAMSN1-202ENST00000400564 WNT11O96014 354 aa7.46□□□□□ -1.22
SAMSN1-202ENST00000400564 MCM4P33991 863 aa7.46□□□□□ -1.22
SAMSN1-202ENST00000400564 RBM25P49756 843 aaKnown RBP7.46□□□□□ -1.22
SAMSN1-202ENST00000400564 IFI16Q16666 785 aaKnown RBP7.46□□□□□ -1.22
SAMSN1-202ENST00000400564 NKPD1Q17RQ9 610 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms