RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 IRX4P78413 519 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 CCDC125Q86Z20 511 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 MLKLQ8NB16 471 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 DUOX2Q9NRD8 1548 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 BAIAP2L1Q9UHR4 511 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 PHLDB3Q6NSJ2 640 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 P3H4Q92791 437 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 GDAP1L1Q96MZ0 367 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 RLBP1P12271 317 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 SF3A3Q12874 501 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSMD1-202ENST00000400186 BRD3Q15059 726 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 NIP7Q9Y221 180 aaKnown RBP eCLIP10.64□□□□□ -0.71
CSMD1-202ENST00000400186 ACEP12821 1306 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 PPFIA2O75334 1257 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 OPHN1O60890 802 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 LUC7L3O95232 432 aaKnown RBP10.64□□□□□ -0.71
CSMD1-202ENST00000400186 SEC24BO95487 1268 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 PIK3AP1Q6ZUJ8 805 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 SLF1Q9BQI6 1058 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 NCOA5Q9HCD5 579 aaKnown RBP10.64□□□□□ -0.71
CSMD1-202ENST00000400186 ZBTB40Q9NUA8 1239 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 HIP1RO75146 1068 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 KDM2BQ8NHM5 1336 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 STX2P32856 288 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 COG7P83436 770 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 KRT12Q99456 494 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
CSMD1-202ENST00000400186 SLC27A2O14975 620 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 RNF40O75150 1001 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 MBD4O95243 580 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 TTC38Q5R3I4 469 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 SAR1BQ9Y6B6 198 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 TAB2Q9NYJ8 693 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 FCHSD1Q86WN1 690 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 PARP2Q9UGN5 583 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 ARHGAP42A6NI28 874 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 BCRP11274 1271 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 CACYBPQ9HB71 228 aaKnown RBP10.63□□□□□ -0.71
CSMD1-202ENST00000400186 PPP2R5CQ13362 524 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 CCDC84Q86UT8 332 aaPredicted RBP10.63□□□□□ -0.71
CSMD1-202ENST00000400186 TRIM4Q9C037 500 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 GLT8D2Q9H1C3 349 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 MRPL44Q9H9J2 332 aaKnown RBP10.63□□□□□ -0.71
CSMD1-202ENST00000400186 JAG2Q9Y219 1238 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 MGEA5O60502 916 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 CALCRLQ16602 461 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 VPS37BQ9H9H4 285 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 HAUS2Q9NVX0 235 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 TBC1D7Q9P0N9 293 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 AFG3L2Q9Y4W6 797 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 UNC13AQ9UPW8 1703 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 CTNNA1P35221 906 aaKnown RBP10.63□□□□□ -0.71
CSMD1-202ENST00000400186 STRN3Q13033 797 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 Q9H521 79 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 WDR70Q9NW82 654 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 KLHL14Q9P2G3 628 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 WWC3Q9ULE0 1092 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 MYO9BQ13459 2157 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 SLC8A1P32418 973 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 IQCDQ96DY2 449 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 GPCPD1Q9NPB8 672 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 MAPKBP1O60336 1514 aa10.63□□□□□ -0.71
CSMD1-202ENST00000400186 FBLN1P23142 703 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 FANCAO15360 1455 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 PLB1Q6P1J6 1458 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 ARHGEF35A5YM69 484 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 CDAN1Q8IWY9 1227 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 USTQ9Y2C2 406 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 PRAG1Q86YV5 1406 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 B4E1Z4 1266 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 KRT28Q7Z3Y7 464 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 SPATS2Q86XZ4 545 aaKnown RBP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 C2CD5Q86YS7 1000 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 TROVE2P10155 538 aaKnown RBP eCLIP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 TMEM87BQ96K49 555 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 ANKRD2Q9GZV1 360 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 MED4Q9NPJ6 270 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 NUP160Q12769 1436 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 PRPF31Q8WWY3 499 aaKnown RBP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 RAD51AP2Q09MP3 1159 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 MYCBPQ99417 103 aaPredicted RBP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 CWF19L2Q2TBE0 894 aaKnown RBP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 STAG1Q8WVM7 1258 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 GCC2Q8IWJ2 1684 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 HVCN1Q96D96 273 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 PHBP35232 272 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 NUCKS1Q9H1E3 243 aaKnown RBP10.62□□□□□ -0.71
CSMD1-202ENST00000400186 RIMS2Q9UQ26 1411 aa10.62□□□□□ -0.71
CSMD1-202ENST00000400186 KLHL30Q0D2K2 578 aa10.61□□□□□ -0.71
CSMD1-202ENST00000400186 SLC12A2P55011 1212 aa10.61□□□□□ -0.71
CSMD1-202ENST00000400186 PPP2R5EQ16537 467 aa10.61□□□□□ -0.71
CSMD1-202ENST00000400186 RSPH3Q86UC2 560 aa10.61□□□□□ -0.71
CSMD1-202ENST00000400186 BCL2L12Q9HB09 334 aa10.61□□□□□ -0.71
CSMD1-202ENST00000400186 ABCA10Q8WWZ4 1543 aa10.61□□□□□ -0.71
CSMD1-202ENST00000400186 IBTKQ9P2D0 1353 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms