RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 ZNF790Q6PG37 636 aa15.33■□□□□ 0.04
VAPA-202ENST00000400000 LRRC47Q8N1G4 583 aaKnown RBP15.33■□□□□ 0.04
VAPA-202ENST00000400000 GRIN2AQ12879 1464 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 GTF2A1P52655 376 aaPredicted RBP15.32■□□□□ 0.04
VAPA-202ENST00000400000 HDAC1Q13547 482 aaPredicted RBP15.32■□□□□ 0.04
VAPA-202ENST00000400000 TTF2Q9UNY4 1162 aaKnown RBP15.32■□□□□ 0.04
VAPA-202ENST00000400000 PPME1Q9Y570 386 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 RPS6KB1P23443 525 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 PPP2R3AQ06190 1150 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 INTS8Q75QN2 995 aaKnown RBP15.32■□□□□ 0.04
VAPA-202ENST00000400000 TTC30BQ8N4P2 665 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 SAMD15Q9P1V8 674 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 CTTNBP2NLQ9P2B4 639 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 ASIC3Q9UHC3 531 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
VAPA-202ENST00000400000 UBXN2AP68543 259 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 ARHGEF16Q5VV41 709 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 CLRN2A0PK11 232 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 GSDMBQ8TAX9 411 aa15.32■□□□□ 0.04
VAPA-202ENST00000400000 EXOC3O60645 756 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 NOL3O60936 208 aaKnown RBP15.31■□□□□ 0.04
VAPA-202ENST00000400000 PCDHB13Q9Y5F0 798 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 ZNF532Q9HCE3 1301 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 SLC4A1P02730 911 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 C10orf67Q8IYJ2 551 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 CCDC170Q8IYT3 715 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
VAPA-202ENST00000400000 TBC1D8O95759 1140 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 ALAS1P13196 640 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 RIOK1Q9BRS2 568 aaKnown RBP15.31■□□□□ 0.04
VAPA-202ENST00000400000 TRIM37O94972 964 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 XRCC6P12956 609 aaKnown RBP eCLIP15.31■□□□□ 0.048e-6■■□□□ 12.6
VAPA-202ENST00000400000 KIAA1524Q8TCG1 905 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 NLRC4Q9NPP4 1024 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 CSADQ9Y600 493 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 SYNRGQ9UMZ2 1314 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 PDE8AO60658 829 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 VAV2P52735 878 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 CLUL1Q15846 466 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 SDR42E1Q8WUS8 393 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 SUCLG2Q96I99 432 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 ABCF3Q9NUQ8 709 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
VAPA-202ENST00000400000 VAMP4O75379 141 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 ABCB4P21439 1286 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
VAPA-202ENST00000400000 ZNF365Q70YC5 407 aa15.31■□□□□ 0.04
VAPA-202ENST00000400000 SKA2Q8WVK7 121 aaPredicted RBP15.31■□□□□ 0.04
VAPA-202ENST00000400000 UTP11Q9Y3A2 253 aaKnown RBP15.31■□□□□ 0.04
VAPA-202ENST00000400000 ADCY7P51828 1080 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 TNNC1P63316 161 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 TACC3Q9Y6A5 838 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 ELP1O95163 1332 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 CEP104O60308 925 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 VPS41P49754 854 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 LIN9Q5TKA1 542 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 EEF2KMTQ96G04 330 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 MLXIPQ9HAP2 919 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 SETDB1Q15047 1291 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 UBN2Q6ZU65 1347 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 DYNC1I1O14576 645 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 JAK2O60674 1132 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 KCNH3Q9ULD8 1083 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.3■□□□□ 0.043e-10■□□□□ 11
VAPA-202ENST00000400000 ARHGEF2Q92974 986 aaKnown RBP15.3■□□□□ 0.04
VAPA-202ENST00000400000 NKIRAS1Q9NYS0 192 aa15.3■□□□□ 0.04
VAPA-202ENST00000400000 BAG6P46379 1132 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 TTC14Q96N46 770 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 TSGA10Q9BZW7 698 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.29■□□□□ 0.04
VAPA-202ENST00000400000 MAP3K19Q56UN5 1328 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 TFAP4Q01664 338 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 TYW1BQ6NUM6 668 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 CNNM4Q6P4Q7 775 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 SPATA5Q8NB90 893 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 DNM3Q9UQ16 869 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 PNOCQ13519 176 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 C2CD5Q86YS7 1000 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 FAM207AQ9NSI2 230 aaPredicted RBP15.29■□□□□ 0.04
VAPA-202ENST00000400000 FLT4P35916 1363 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 SDCCAG8Q86SQ7 713 aaPredicted RBP15.29■□□□□ 0.04
VAPA-202ENST00000400000 GIPC1O14908 333 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 GYG1P46976 350 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 KAZNQ674X7 775 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 TXNDC9O14530 226 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 TECP42680 631 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 EVCP57679 992 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 CCDC26Q8TAB7 109 aa15.29■□□□□ 0.04
VAPA-202ENST00000400000 DEXIO95424 95 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 ANO1Q5XXA6 986 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 NELFBQ8WX92 580 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 STMN2Q93045 179 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 CARD10Q9BWT7 1032 aa15.28■□□□□ 0.04
VAPA-202ENST00000400000 MKRN1Q9UHC7 482 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms