RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 HDAC1Q13547 482 aaPredicted RBP10.14□□□□□ -0.79
USP16-202ENST00000399973 MTMR2Q13614 643 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 MOGSQ13724 837 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 B4GALNT3Q6L9W6 998 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 FASTKD5Q7L8L6 764 aaKnown RBP10.14□□□□□ -0.79
USP16-202ENST00000399973 FOXP4Q8IVH2 680 aaPredicted RBP10.14□□□□□ -0.79
USP16-202ENST00000399973 AMOTL1Q8IY63 956 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 KBTBD3Q8NAB2 608 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 ZNF280CQ8ND82 737 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 SMCR8Q8TEV9 937 aaPredicted RBP10.14□□□□□ -0.79
USP16-202ENST00000399973 GCC1Q96CN9 775 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 FSD1Q9BTV5 496 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 ZCCHC17Q9NP64 241 aaKnown RBP10.14□□□□□ -0.79
USP16-202ENST00000399973 AFG3L2Q9Y4W6 797 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 SLC4A4Q9Y6R1 1079 aa10.14□□□□□ -0.79
USP16-202ENST00000399973 MPHOSPH10O00566 681 aaKnown RBP10.13□□□□□ -0.79
USP16-202ENST00000399973 TLR2O60603 784 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 GLRX3O76003 335 aaKnown RBP10.13□□□□□ -0.79
USP16-202ENST00000399973 GH2P01242 217 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 PLCD1P51178 756 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 JAG1P78504 1218 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 EVX2Q03828 476 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 AAMPQ13685 434 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 KIF22Q14807 665 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 TREML2Q5T2D2 321 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 GPAT2Q6NUI2 795 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 FBXO46Q6PJ61 603 aaPredicted RBP10.13□□□□□ -0.79
USP16-202ENST00000399973 OTOP1Q7RTM1 612 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 PI4K2BQ8TCG2 481 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 FEZ1Q99689 392 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 LNPKQ9C0E8 428 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 EHD4Q9H223 541 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 RWDD1Q9H446 243 aaPredicted RBP10.13□□□□□ -0.79
USP16-202ENST00000399973 EFCC1Q9HA90 598 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 DCP1AQ9NPI6 582 aaPredicted RBP10.13□□□□□ -0.79
USP16-202ENST00000399973 HPS5Q9UPZ3 1129 aa10.13□□□□□ -0.79
USP16-202ENST00000399973 RBBP6Q7Z6E9 1792 aaKnown RBP10.13□□□□□ -0.79
USP16-202ENST00000399973 CYP2D7A0A087X1C5 515 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 SOX10P56693 466 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 RAB3GAP1Q15042 981 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 ZYXQ15942 572 aaKnown RBP10.12□□□□□ -0.79
USP16-202ENST00000399973 PKN2Q16513 984 aaKnown RBP10.12□□□□□ -0.79
USP16-202ENST00000399973 ABCB5Q2M3G0 1257 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 LRRFIP1Q32MZ4 808 aaKnown RBP10.12□□□□□ -0.79
USP16-202ENST00000399973 SLC44A5Q8NCS7 719 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 APPBP2Q92624 585 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 TBC1D2Q9BYX2 928 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 PUS7LQ9H0K6 701 aaKnown RBP10.12□□□□□ -0.79
USP16-202ENST00000399973 TMOD4Q9NZQ9 345 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 AGTPBP1Q9UPW5 1226 aa10.12□□□□□ -0.79
USP16-202ENST00000399973 MYH4Q9Y623 1939 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 ADGRA2Q96PE1 1338 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 M0R2C6 588 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 RNF113AO15541 343 aaKnown RBP10.11□□□□□ -0.79
USP16-202ENST00000399973 ZFYP08048 801 aaPredicted RBP10.11□□□□□ -0.79
USP16-202ENST00000399973 SHMT1P34896 483 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 LACTBP83111 547 aaPredicted RBP10.11□□□□□ -0.79
USP16-202ENST00000399973 ARHGEF6Q15052 776 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 CERKLQ49MI3 558 aaPredicted RBP10.11□□□□□ -0.79
USP16-202ENST00000399973 METTL16Q86W50 562 aaKnown RBP10.11□□□□□ -0.79
USP16-202ENST00000399973 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
USP16-202ENST00000399973 DYNLL2Q96FJ2 89 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 ARHGAP39Q9C0H5 1083 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 CABP5Q9NP86 173 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 ATP8A2Q9NTI2 1148 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 PNMA3Q9UL41 463 aa10.11□□□□□ -0.79
USP16-202ENST00000399973 GREB1LQ9C091 1923 aaPredicted RBP10.11□□□□□ -0.79
USP16-202ENST00000399973 SALL3Q9BXA9 1300 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 PARP14Q460N5 1801 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 GPAA1O43292 621 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 IGHDP01880 384 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 APPP05067 770 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 TDO2P48775 406 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 BACE1P56817 501 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 IRX3P78415 501 aaPredicted RBP10.1□□□□□ -0.79
USP16-202ENST00000399973 CAP1Q01518 475 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 PABPC4Q13310 644 aaKnown RBP eCLIP10.1□□□□□ -0.79
USP16-202ENST00000399973 TATDN1Q6P1N9 297 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 STK11IPQ8N1F8 1099 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 OSBP2Q969R2 916 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 WDR18Q9BV38 432 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 GINM1Q9NU53 330 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 ARPP21Q9UBL0 812 aaPredicted RBP10.1□□□□□ -0.79
USP16-202ENST00000399973 PTPN22Q9Y2R2 807 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 LAMA4Q16363 1823 aa10.1□□□□□ -0.79
USP16-202ENST00000399973 MINDY4BA8MYZ0 360 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 USP17L10C9JJH3 530 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 USP17L12C9JPN9 530 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 USP17L21D6R901 530 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 SMIM22K7EJ46 135 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 FMNL1O95466 1100 aaPredicted RBP10.09□□□□□ -0.79
USP16-202ENST00000399973 OSBPP22059 807 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 PDE1AP54750 535 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 C17orf99Q6UX52 265 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 CLEC10AQ8IUN9 316 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 SMC5Q8IY18 1101 aa10.09□□□□□ -0.79
USP16-202ENST00000399973 SEC62Q99442 399 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms