RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 PAK2Q13177 524 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 HACE1Q8IYU2 909 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 TRIM56Q9BRZ2 755 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 ADGRF5Q8IZF2 1346 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 WWC3Q9ULE0 1092 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 MED10Q9BTT4 135 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 GINS2Q9Y248 185 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 RASSF2P50749 326 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 RSAD2Q8WXG1 361 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 MYO1AQ9UBC5 1043 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 PPFIA2O75334 1257 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 GCNT3O95395 438 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 INPP1P49441 399 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 TROVE2P10155 538 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 XRCC6P12956 609 aaKnown RBP eCLIP13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 IDI1Q13907 227 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 DNM3Q9UQ16 869 aa13.64□□□□□ -0.23
CACNA1C-219ENST00000399649 PLB1Q6P1J6 1458 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 MAST3O60307 1309 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 KRT81Q14533 505 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 ANKRD20A3Q5VUR7 823 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 NXNQ6DKJ4 435 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 TMEM87BQ96K49 555 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 PALM2Q8IXS6 379 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 TEX14Q8IWB6 1497 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 U2AF2P26368 475 aaKnown RBP eCLIP13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 PHBP35232 272 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 ADCY7P51828 1080 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 EIF6P56537 245 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 PPFIA1Q13136 1202 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 SFMBT2Q5VUG0 894 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 HOOK2Q96ED9 719 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 MRPL44Q9H9J2 332 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 RPS6KB1P23443 525 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 PSPC1Q8WXF1 523 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 INTS4Q96HW7 963 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 KRT12Q99456 494 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 KCNH3Q9ULD8 1083 aa13.63□□□□□ -0.23
CACNA1C-219ENST00000399649 RBBP5Q15291 538 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 CFAP221Q4G0U5 840 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 SPDYE16A6NNV3 312 aaPredicted RBP13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 FLOT1O75955 427 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 UFL1O94874 794 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 IL2RBP14784 551 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 ANO1Q5XXA6 986 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 RAB17Q9H0T7 212 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 ZNF408Q9H9D4 720 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 BICC1Q9H694 974 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 B4E1Z4 1266 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 CD19P15391 556 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 MGARPQ8TDB4 240 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 GBP5Q96PP8 586 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 PCF11O94913 1555 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 CUTAO60888 179 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 RPS6KA1Q15418 735 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 TTC38Q5R3I4 469 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 TBC1D7Q9P0N9 293 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 PPME1Q9Y570 386 aa13.62□□□□□ -0.23
CACNA1C-219ENST00000399649 PPIP5K1Q6PFW1 1433 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 EXOC3O60645 756 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 CALCRLQ16602 461 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 PEX26Q7Z412 305 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 SNX29Q8TEQ0 813 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 FANCCQ00597 558 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 LONRF2Q1L5Z9 754 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 MUM1Q2TAK8 710 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 BSPRYQ5W0U4 402 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 NLRP12P59046 1061 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 TRAPPC3LQ5T215 181 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 SCYL1Q96KG9 808 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 KLHL30Q0D2K2 578 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 ZYXQ15942 572 aaKnown RBP13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 PNMA8AQ86V59 439 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 ANO3Q9BYT9 981 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 STK38LQ9Y2H1 464 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 RNF40O75150 1001 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 RAB20Q9NX57 234 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 IMPACTQ9P2X3 320 aa13.61□□□□□ -0.23
CACNA1C-219ENST00000399649 PFDN6O15212 129 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 SMIM24O75264 130 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 RABEP2Q9H5N1 569 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 ARMT1Q9H993 441 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 KRT25Q7Z3Z0 450 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 TRIM50Q86XT4 487 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 CERS3Q8IU89 383 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 TMTC1Q8IUR5 882 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 LINS1Q8NG48 757 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 GRK7Q8WTQ7 553 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 NELFBQ8WX92 580 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 ARHGAP42A6NI28 874 aa13.6□□□□□ -0.23
CACNA1C-219ENST00000399649 COG7P83436 770 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms