RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 ZNF569Q5MCW4 686 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 CCDC129Q6ZRS4 1044 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 SRGAP1Q7Z6B7 1085 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 TTC14Q96N46 770 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 ARPP21Q9UBL0 812 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 PNMA2Q9UL42 364 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 CLRN2A0PK11 232 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 SKIV2LQ15477 1246 aaKnown RBP13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 CDC37L1Q7L3B6 337 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
CACNA1C-213ENST00000399629 TYW5A2RUC4 315 aaKnown RBP13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 FRMPD2Q68DX3 1309 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 GOLGA6CA6NDK9 693 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 GOLGA6BA6NDN3 693 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 GOLGA6DP0CG33 693 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 GOLGA6AQ9NYA3 693 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 XPAP23025 273 aaPredicted RBP13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 CALCOCO2Q13137 446 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 APPBP2Q92624 585 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 TBC1D7Q9P0N9 293 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 CTAGE15A4D2H0 777 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 GPAA1O43292 621 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 CTAGE8P0CG41 777 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 USPL1Q5W0Q7 1092 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 CTAGE6Q86UF2 777 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 CTAGE4Q8IX94 777 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 EXOC3O60645 756 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 Q3C1V9 767 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 TTC30AQ86WT1 665 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
CACNA1C-213ENST00000399629 TFAP4Q01664 338 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 FAM47AQ5JRC9 791 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 GPR161Q8N6U8 529 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 GCNAQ96QF7 691 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 IBTKQ9P2D0 1353 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 CTAGE9A4FU28 777 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 ATP2C2O75185 946 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 ZSCAN20P17040 1043 aaPredicted RBP13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 LIG4P49917 911 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 CEP128Q6ZU80 1094 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 VPS52Q8N1B4 723 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 CAPZA3Q96KX2 299 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 KCNK9Q9NPC2 374 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 CETN3O15182 167 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 USP14P54578 494 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 CCDC89Q8N998 374 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 IPO4Q8TEX9 1081 aaKnown RBP13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 SUGCTQ9HAC7 445 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 TTLL7Q6ZT98 887 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 METTL23Q86XA0 190 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 PPP1R9BQ96SB3 815 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 AKT3Q9Y243 479 aa13.43□□□□□ -0.26
CACNA1C-213ENST00000399629 CCDC93Q567U6 631 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 LRWD1Q9UFC0 647 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 CLUL1Q15846 466 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 KRT24Q2M2I5 525 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 SATB1Q01826 763 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 IRX5P78411 483 aaPredicted RBP13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 CEP85Q6P2H3 762 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 LGR6Q9HBX8 967 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 BTDP43251 543 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 TLR3O15455 904 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 VIMP08670 466 aaKnown RBP13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 CASC4Q6P4E1 433 aa13.42□□□□□ -0.26
CACNA1C-213ENST00000399629 POLGP54098 1239 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 HDAC1Q13547 482 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 TFDP1Q14186 410 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 ABCB5Q2M3G0 1257 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 FTOQ9C0B1 505 aaKnown RBP eCLIP13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 XKR9Q5GH70 373 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 TTC38Q5R3I4 469 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 COL17A1Q9UMD9 1497 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 F13A1P00488 732 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 ATXN8OSP0DMR3 200 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 ICA1Q05084 483 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 MUM1L1Q5H9M0 696 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 UBL4BQ8N7F7 174 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 ST7Q9NRC1 585 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 ARID4AP29374 1257 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 GUCA1BQ9UMX6 200 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 BCRP11274 1271 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 SYT1P21579 422 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 KRT81Q14533 505 aa13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 HERC4Q5GLZ8 1057 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 RYBPQ8N488 228 aaPredicted RBP13.41□□□□□ -0.26
CACNA1C-213ENST00000399629 ERCC6LQ2NKX8 1250 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 DYMQ7RTS9 669 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms