RNA–Protein interactions for RNA: ENST00000399597.5

CACNA1C-207, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-207ENST00000399597 GCKP35557 465 aa12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 ZNF569Q5MCW4 686 aa12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 MAGEB6Q8N7X4 407 aa12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 ANKRD42Q8N9B4 389 aa12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 RIOK1Q9BRS2 568 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 CASKIN1Q8WXD9 1431 aa12.35□□□□□ -0.43
CACNA1C-207ENST00000399597 SERPINB6P35237 376 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 BIRC3Q13489 604 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 AKAP4Q5JQC9 854 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 HHATQ5VTY9 493 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 GLG1Q92896 1179 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 ALKBH8Q96BT7 664 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 DENND2AQ9ULE3 1009 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 TCP10L2B9ZVM9 353 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 GNGT2O14610 69 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 CTAGE5O15320 804 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 ZNF365Q70YC5 407 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 FAM76AQ8TAV0 307 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 CNNM2Q9H8M5 875 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 DDX39AO00148 427 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 DAB2P98082 770 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 ZBTB17Q13105 803 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 GANCQ8TET4 914 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 ATP6V0A1Q93050 837 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 ARFGAP3Q9NP61 516 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 SMYD2Q9NRG4 433 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 I3L4J1 428 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 DKC1O60832 514 aaKnown RBP eCLIP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 OATP04181 439 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 STX17P56962 302 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 ASIC1P78348 528 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 VCX3AQ9NNX9 186 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 ZBED9Q6R2W3 1325 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 NUCB1Q02818 461 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 CACTINQ8WUQ7 758 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 PYM1Q9BRP8 204 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 GIMAP4Q9NUV9 329 aa12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 EIF4G3O43432 1585 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-207ENST00000399597 DDAH1O94760 285 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 STK10O94804 968 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 CYLC1P35663 651 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 UBXN1Q04323 297 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 CHD1LQ86WJ1 897 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 MYLK4Q86YV6 388 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 GJB2P29033 226 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 SZRD1Q7Z422 152 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 PLCH2O75038 1416 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 LONRF3Q496Y0 759 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 PARP10Q53GL7 1025 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 VSIG1Q86XK7 387 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 HDAC11Q96DB2 347 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 CFTRP13569 1480 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 HOXD10P28358 340 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 ZNF280CQ8ND82 737 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 TTC1Q99614 292 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 BAG5Q9UL15 447 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 SLC4A7Q9Y6M7 1214 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 NVLO15381 856 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 TRPA1O75762 1119 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 TBC1D8O95759 1140 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
CACNA1C-207ENST00000399597 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 SLC12A2P55011 1212 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 ASZ1Q8WWH4 475 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 PIK3R4Q99570 1358 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 SMTNP53814 917 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 ZNF654Q8IZM8 581 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 EHBP1Q8NDI1 1231 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 MCUQ8NE86 351 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 IWS1Q96ST2 819 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 GPBP1L1Q9HC44 474 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 WHAMMP3Q1A5X7 153 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 CCDC38Q502W7 563 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 LMBR1LQ6UX01 489 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 JAKMIP2Q96AA8 810 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 SLC10A4Q96EP9 437 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 HAUS8Q9BT25 410 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 SPOPO43791 374 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 RETREG2Q8NC44 543 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 EVI5LQ96CN4 794 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 DCAF5Q96JK2 942 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 TRIM4Q9C037 500 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
CACNA1C-207ENST00000399597 KRT19P08727 400 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms