RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 ME3Q16798 604 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 SHROOM1Q2M3G4 852 aaPredicted RBP19.1■□□□□ 0.65
TNRC18-202ENST00000399434 TMEM87BQ96K49 555 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 MKNK2Q9HBH9 465 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 IL17RBQ9NRM6 502 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 SWAP70Q9UH65 585 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 BRPF3Q9ULD4 1205 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 LIMCH1Q9UPQ0 1083 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 TNKSO95271 1327 aa19.1■□□□□ 0.65
TNRC18-202ENST00000399434 AKR1B1P15121 316 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 EPHX2P34913 555 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 TFAP4Q01664 338 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 TNFAIP1Q13829 316 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 RRP1BQ14684 758 aaKnown RBP19.09■□□□□ 0.65
TNRC18-202ENST00000399434 ANKRD1Q15327 319 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 APOBEC3FQ8IUX4 373 aaKnown RBP19.09■□□□□ 0.65
TNRC18-202ENST00000399434 ENAHQ8N8S7 591 aaPredicted RBP19.09■□□□□ 0.65
TNRC18-202ENST00000399434 MTA3Q9BTC8 594 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 ANGEL1Q9UNK9 670 aaKnown RBP19.09■□□□□ 0.65
TNRC18-202ENST00000399434 PITPNM2Q9BZ72 1349 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 MYH4Q9Y623 1939 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 TNNI2P48788 182 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 CUL4AQ13619 759 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 TMEM67Q5HYA8 995 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 RCSD1Q6JBY9 416 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 TATDN1Q6P1N9 297 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 ZSCAN10Q96SZ4 725 aaPredicted RBP19.09■□□□□ 0.65
TNRC18-202ENST00000399434 DEFB129Q9H1M3 183 aa19.09■□□□□ 0.65
TNRC18-202ENST00000399434 TAF1DQ9H5J8 278 aaPredicted RBP19.09■□□□□ 0.65
TNRC18-202ENST00000399434 OTOFQ9HC10 1997 aa19.08■□□□□ 0.65
TNRC18-202ENST00000399434 IGKV6D-41A0A0C4DH26 115 aa19.08■□□□□ 0.64
TNRC18-202ENST00000399434 TSPY2A6NKD2 308 aa19.08■□□□□ 0.64
TNRC18-202ENST00000399434 IFIT3O14879 490 aaKnown RBP19.08■□□□□ 0.64
TNRC18-202ENST00000399434 NT5C2P49902 561 aa19.08■□□□□ 0.64
TNRC18-202ENST00000399434 SGMS1Q86VZ5 419 aa19.08■□□□□ 0.64
TNRC18-202ENST00000399434 FOXP4Q8IVH2 680 aaPredicted RBP19.08■□□□□ 0.64
TNRC18-202ENST00000399434 CRACR2BQ8N4Y2 399 aaPredicted RBP19.08■□□□□ 0.64
TNRC18-202ENST00000399434 NEDD1Q8NHV4 660 aa19.08■□□□□ 0.64
TNRC18-202ENST00000399434 TAOK2Q9UL54 1235 aa19.08■□□□□ 0.64
TNRC18-202ENST00000399434 DOCK1Q14185 1865 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 LIFRP42702 1097 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 JAG1P78504 1218 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 FGD1P98174 961 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 USP50Q70EL3 339 aaPredicted RBP19.07■□□□□ 0.64
TNRC18-202ENST00000399434 NECAB1Q8N987 351 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 UBAC1Q9BSL1 405 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 ZNF287Q9HBT7 754 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 HERC5Q9UII4 1024 aaKnown RBP19.07■□□□□ 0.64
TNRC18-202ENST00000399434 HPS5Q9UPZ3 1129 aa19.07■□□□□ 0.64
TNRC18-202ENST00000399434 KLF18A0A0U1RQI7 1052 aa19.06■□□□□ 0.64
TNRC18-202ENST00000399434 TSPY3P0CV98 308 aa19.06■□□□□ 0.64
TNRC18-202ENST00000399434 TSPY8P0CW00 308 aa19.06■□□□□ 0.64
TNRC18-202ENST00000399434 CLEC10AQ8IUN9 316 aa19.06■□□□□ 0.64
TNRC18-202ENST00000399434 ZNF444Q8N0Y2 327 aaPredicted RBP19.06■□□□□ 0.64
TNRC18-202ENST00000399434 TCP11L1Q9NUJ3 509 aa19.06■□□□□ 0.64
TNRC18-202ENST00000399434 NID2Q14112 1375 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 TBC1D12O60347 775 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 PDIA3P30101 505 aaKnown RBP19.05■□□□□ 0.64
TNRC18-202ENST00000399434 NOVP48745 357 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 WTAPQ15007 396 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 NBPF12Q5TAG4 269 aaPredicted RBP19.05■□□□□ 0.64
TNRC18-202ENST00000399434 APOA5Q6Q788 366 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 DLK2Q6UY11 383 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 IQCA1Q86XH1 822 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 RAB11FIP4Q86YS3 637 aa19.05■□□□□ 0.64
TNRC18-202ENST00000399434 ZSCAN31Q96LW9 406 aaPredicted RBP19.05■□□□□ 0.64
TNRC18-202ENST00000399434 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 ADM5C9JUS6 153 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 PFKFB2O60825 505 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 STK3Q13188 491 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 PRAMEF18Q5VWM3 479 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 MIGA2Q7L4E1 593 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 SPRYD3Q8NCJ5 442 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 ANKS1AQ92625 1134 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 GTF3C6Q969F1 213 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 CEP95Q96GE4 821 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 MYL10Q9BUA6 226 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.04■□□□□ 0.64
TNRC18-202ENST00000399434 SH2B1Q9NRF2 756 aaPredicted RBP19.04■□□□□ 0.64
TNRC18-202ENST00000399434 FOXD4L1Q9NU39 408 aa19.04■□□□□ 0.64
TNRC18-202ENST00000399434 GOLGA8BA8MQT2 603 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 DTNBO60941 627 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 GDF11O95390 407 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 GUCY1A2P33402 732 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 SART3Q15020 963 aaKnown RBP19.03■□□□□ 0.64
TNRC18-202ENST00000399434 CCDC83Q8IWF9 413 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 ZNF274Q96GC6 653 aaPredicted RBP19.03■□□□□ 0.64
TNRC18-202ENST00000399434 PPP2R3BQ9Y5P8 575 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 PHF20L1A8MW92 1017 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 POTEIP0CG38 1075 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 POTEJP0CG39 1038 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 SCRN1Q12765 414 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 CERKLQ49MI3 558 aaPredicted RBP19.03■□□□□ 0.64
TNRC18-202ENST00000399434 ZNF654Q8IZM8 581 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 TRIM34Q9BYJ4 488 aa19.03■□□□□ 0.64
TNRC18-202ENST00000399434 NCOA5Q9HCD5 579 aaKnown RBP19.03■□□□□ 0.64
TNRC18-202ENST00000399434 PHIPQ8WWQ0 1821 aa19.02■□□□□ 0.64
TNRC18-202ENST00000399434 RXRAP19793 462 aa19.02■□□□□ 0.63
TNRC18-202ENST00000399434 IFIT1BQ5T764 474 aaKnown RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms