RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 ARHGAP39Q9C0H5 1083 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 PNMA3Q9UL41 463 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 TAOK2Q9UL54 1235 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 CENPFP49454 3210 aa17.97■□□□□ 0.47
SMIM11A-203ENST00000399299 GDF11O95390 407 aa17.96■□□□□ 0.47
SMIM11A-203ENST00000399299 HMGCS2P54868 508 aa17.96■□□□□ 0.47
SMIM11A-203ENST00000399299 PABPC4Q13310 644 aaKnown RBP eCLIP17.96■□□□□ 0.47
SMIM11A-203ENST00000399299 SLC4A8Q2Y0W8 1093 aa17.96■□□□□ 0.47
SMIM11A-203ENST00000399299 TREML2Q5T2D2 321 aa17.96■□□□□ 0.47
SMIM11A-203ENST00000399299 DCP1AQ9NPI6 582 aaPredicted RBP17.96■□□□□ 0.47
SMIM11A-203ENST00000399299 MBD4O95243 580 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 POLR3DP05423 398 aaPredicted RBP17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 PSMC4P43686 418 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 PLCD1P51178 756 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 BACE1P56817 501 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 GABPAQ06546 454 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 SMCR8Q8TEV9 937 aaPredicted RBP17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 SDR42E1Q8WUS8 393 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 TRIM47Q96LD4 638 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 ARMT1Q9H993 441 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 ATP8A2Q9NTI2 1148 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 MCM9Q9NXL9 1143 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 PTCH2Q9Y6C5 1203 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 TTC41PQ6P2S7 1318 aa17.95■□□□□ 0.46
SMIM11A-203ENST00000399299 MYH8P13535 1937 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 BAZ2AQ9UIF9 1905 aaKnown RBP17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 C19orf81C9J6K1 198 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 GH2P01242 217 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 CTGFP29279 349 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 SHMT1P34896 483 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 MTMR2Q13614 643 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 SHROOM1Q2M3G4 852 aaPredicted RBP17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 KBTBD3Q8NAB2 608 aa17.94■□□□□ 0.46
SMIM11A-203ENST00000399299 HOXD10P28358 340 aa17.93■□□□□ 0.46
SMIM11A-203ENST00000399299 SLFNL1Q499Z3 407 aa17.93■□□□□ 0.46
SMIM11A-203ENST00000399299 CERKLQ49MI3 558 aaPredicted RBP17.93■□□□□ 0.46
SMIM11A-203ENST00000399299 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
SMIM11A-203ENST00000399299 SRRDQ9UH36 339 aa17.93■□□□□ 0.46
SMIM11A-203ENST00000399299 KIAA0100Q14667 2235 aaKnown RBP17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 ERC2O15083 957 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 GCLCP48506 637 aaPredicted RBP17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 FCGRTP55899 365 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 HDAC1Q13547 482 aaPredicted RBP17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 FAM110CQ1W6H9 321 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 ABCB5Q2M3G0 1257 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 SLC9C1Q4G0N8 1177 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 TSHZ3Q63HK5 1081 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 NBPF11Q86T75 865 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 ZNF333Q96JL9 665 aa17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 ASCC2Q9H1I8 757 aaPredicted RBP17.92■□□□□ 0.46
SMIM11A-203ENST00000399299 FMNL1O95466 1100 aaPredicted RBP17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 CHGBP05060 677 aa17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 ZFYP08048 801 aaPredicted RBP17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 OSBPP22059 807 aa17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 HOXA7P31268 230 aaPredicted RBP17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 PUS7LQ9H0K6 701 aaKnown RBP17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 SWAP70Q9UH65 585 aa17.91■□□□□ 0.46
SMIM11A-203ENST00000399299 PDE4DIPQ5VU43 2346 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 PRKAB2O43741 272 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 USP17L2Q6R6M4 530 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 AMOTL1Q8IY63 956 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 PI4K2BQ8TCG2 481 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 DDRGK1Q96HY6 314 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 MYPNQ86TC9 1320 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 SALL3Q9BXA9 1300 aa17.9■□□□□ 0.46
SMIM11A-203ENST00000399299 MX1P20591 662 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 IRX3P78415 501 aaPredicted RBP17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 EVX2Q03828 476 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 LRRFIP1Q32MZ4 808 aaKnown RBP17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 C12orf60Q5U649 245 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 ANKRD13CQ8N6S4 541 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 APPBP2Q92624 585 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 KIAA1683Q9H0B3 1180 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 EMILIN3Q9NT22 766 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 ZBTB47Q9UFB7 747 aaPredicted RBP17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 SLC4A4Q9Y6R1 1079 aa17.89■□□□□ 0.45
SMIM11A-203ENST00000399299 RNF113AO15541 343 aaKnown RBP17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 CYP2D6P10635 497 aa17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 USP14P54578 494 aa17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 RAB3GAP1Q15042 981 aa17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 OTUD7AQ8TE49 926 aaPredicted RBP17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 STRBPQ96SI9 672 aaKnown RBP17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 FEZ1Q99689 392 aa17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 MORF4L1Q9UBU8 362 aa17.88■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L12C9JPN9 530 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 USP17L21D6R901 530 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 ECM2O94769 699 aaPredicted RBP17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 GUCY1A2P33402 732 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 PRKCZQ05513 592 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 ANKRD45Q5TZF3 282 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 GIMAP6Q6P9H5 292 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 RAET1EQ8TD07 263 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 GTF3C2Q8WUA4 911 aaPredicted RBP17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 OSBP2Q969R2 916 aa17.87■□□□□ 0.45
SMIM11A-203ENST00000399299 DOCK3Q8IZD9 2030 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms