RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 LDHBP07195 334 aaKnown RBP20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TPM4P67936 248 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 FAM177A1Q8N128 213 aaPredicted RBP20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 NUP133Q8WUM0 1156 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 RPGRQ92834 1020 aaKnown RBP20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 SPTLC3Q9NUV7 552 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TFCP2L1Q9NZI6 479 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 SMTNL1A8MU46 457 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 MYO1BO43795 1136 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 NLRP12P59046 1061 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TROAPQ12815 778 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ANKS1AQ92625 1134 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 RBM17Q96I25 401 aaKnown RBP20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 BRMS1Q9HCU9 246 aa20.41■□□□□ 0.86
HLA-DQB1-204ENST00000399084 WDHD1O75717 1129 aaPredicted RBP20.4■□□□□ 0.86
HLA-DQB1-204ENST00000399084 CCDC34Q96HJ3 373 aa20.4■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ZNF287Q9HBT7 754 aa20.4■□□□□ 0.86
HLA-DQB1-204ENST00000399084 AATFQ9NY61 560 aaKnown RBP eCLIP20.4■□□□□ 0.86
HLA-DQB1-204ENST00000399084 TUBE1Q9UJT0 475 aa20.4■□□□□ 0.86
HLA-DQB1-204ENST00000399084 ECM29Q5VYK3 1845 aa20.4■□□□□ 0.86
HLA-DQB1-204ENST00000399084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 BTBD18B2RXH4 712 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 KLRK1P26718 216 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 PRDX5P30044 214 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 HOXA10P31260 410 aaPredicted RBP20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 KIF5BP33176 963 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 FUT2Q10981 343 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 CHAF1AQ13111 956 aaPredicted RBP20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 NOLC1Q14978 699 aaKnown RBP eCLIP20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 PRR5LQ6MZQ0 368 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 KANK3Q6NY19 840 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 DGKHQ86XP1 1220 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 SLF2Q8IX21 1173 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 CTCFLQ8NI51 663 aaPredicted RBP20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 FAM13BQ9NYF5 915 aa20.39■□□□□ 0.86
HLA-DQB1-204ENST00000399084 PTPREP23469 700 aa20.39■□□□□ 0.85
HLA-DQB1-204ENST00000399084 C11orf57Q6ZUT1 292 aaPredicted RBP20.39■□□□□ 0.85
HLA-DQB1-204ENST00000399084 KIAA1524Q8TCG1 905 aa20.39■□□□□ 0.85
HLA-DQB1-204ENST00000399084 PODXL2Q9NZ53 605 aa20.39■□□□□ 0.85
HLA-DQB1-204ENST00000399084 IKBKBO14920 756 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 PLCG2P16885 1265 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 MARCKSP29966 332 aaPredicted RBP20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 SHC4Q6S5L8 630 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 DRC7Q8IY82 874 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TCP11L1Q9NUJ3 509 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 MKRN1Q9UHC7 482 aaKnown RBP20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 LAMB1P07942 1786 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 ROBO3Q96MS0 1386 aa20.38■□□□□ 0.85
HLA-DQB1-204ENST00000399084 GUCY1A2P33402 732 aa20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 C12orf60Q5U649 245 aa20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TMTC3Q6ZXV5 915 aa20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 DHX40Q8IX18 779 aaKnown RBP20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 PHF20Q9BVI0 1012 aa20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TTC12Q9H892 705 aaPredicted RBP20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 KCNH3Q9ULD8 1083 aa20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 SRPRBQ9Y5M8 271 aaKnown RBP20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TNRC6CQ9HCJ0 1690 aaKnown RBP20.37■□□□□ 0.85
HLA-DQB1-204ENST00000399084 KLRG2A4D1S0 409 aaPredicted RBP20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 GYS1P13807 737 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 IL1R1P14778 569 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 KRT2P35908 639 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 GNAQP50148 359 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TXNRD3Q86VQ6 643 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 FAM163AQ96GL9 167 aaPredicted RBP20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 LRRC4BQ9NT99 713 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 BAZ2AQ9UIF9 1905 aaKnown RBP20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 MYH2Q9UKX2 1941 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 SERPINB2P05120 415 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TOB1P50616 345 aaPredicted RBP20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 UBR3Q6ZT12 1888 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 CLIP2Q9UDT6 1046 aa20.36■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TRAPPC10P48553 1259 aa20.35■□□□□ 0.85
HLA-DQB1-204ENST00000399084 PKN1Q16512 942 aa20.35■□□□□ 0.85
HLA-DQB1-204ENST00000399084 FAM182BQ5T319 152 aa20.35■□□□□ 0.85
HLA-DQB1-204ENST00000399084 MCM9Q9NXL9 1143 aa20.35■□□□□ 0.85
HLA-DQB1-204ENST00000399084 IMPACTQ9P2X3 320 aa20.35■□□□□ 0.85
HLA-DQB1-204ENST00000399084 GGA1Q9UJY5 639 aa20.35■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TRIM75PA6NK02 468 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 TSPY2A6NKD2 308 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 USP5P45974 858 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 CT47A1Q5JQC4 288 aaPredicted RBP20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 KRBA2Q6ZNG9 492 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 FERMT2Q96AC1 680 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 PRIMPOLQ96LW4 560 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 SH3GLB2Q9NR46 395 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 KCNJ14Q9UNX9 436 aa20.34■□□□□ 0.85
HLA-DQB1-204ENST00000399084 SPC24Q8NBT2 197 aa20.33■□□□□ 0.85
HLA-DQB1-204ENST00000399084 FBXO2Q9UK22 296 aaPredicted RBP20.33■□□□□ 0.85
HLA-DQB1-204ENST00000399084 SUGT1Q9Y2Z0 365 aa20.33■□□□□ 0.85
HLA-DQB1-204ENST00000399084 V9GY48 417 aaPredicted RBP20.33■□□□□ 0.85
HLA-DQB1-204ENST00000399084 MYH6P13533 1939 aa20.33■□□□□ 0.85
HLA-DQB1-204ENST00000399084 MROH7-TTC4A0A0A0MT08 1334 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CYP2D7A0A087X1C5 515 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CALML3P27482 149 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 GSDMDP57764 484 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms