RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 CHMP2AO43633 222 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 GTF2F1P35269 517 aaKnown RBP eCLIP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 CSRNP2Q9H175 543 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 PLEKHA4Q9H4M7 779 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 AGLP35573 1532 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 ODF2Q5BJF6 829 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 LRRC47Q8N1G4 583 aaKnown RBP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 C6orf50Q9HD87 102 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 RMND1Q9NWS8 449 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 ZSWIM5Q9P217 1185 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 ERLIN1O75477 346 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 SSR1P43307 286 aaKnown RBP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 SOS2Q07890 1332 aaPredicted RBP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 SH2B2O14492 632 aaPredicted RBP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 IGSF22Q8N9C0 903 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 GGA1Q9UJY5 639 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 RGPD8O14715 1765 aaPredicted RBP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 KIF2AO00139 706 aaPredicted RBP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 AMPD3Q01432 767 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 NOSTRINQ8IVI9 506 aa10.29□□□□□ -0.76
SEC24A-202ENST00000398844 BCCIPQ9P287 314 aaKnown RBP eCLIP10.29□□□□□ -0.76
SEC24A-202ENST00000398844 USP8P40818 1118 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 LRRC8AQ8IWT6 810 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.765e-7■□□□□ 9.4
SEC24A-202ENST00000398844 KIF28PB7ZC32 967 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 KCNQ2O43526 872 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 CAVIN2O95810 425 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 CYP2D6P10635 497 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 NELFBQ8WX92 580 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.28□□□□□ -0.76
SEC24A-202ENST00000398844 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.28□□□□□ -0.76
SEC24A-202ENST00000398844 CASP1P29466 404 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.28□□□□□ -0.76
SEC24A-202ENST00000398844 SYMPKQ92797 1274 aaKnown RBP10.28□□□□□ -0.76
SEC24A-202ENST00000398844 FANCLQ9NW38 375 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 UBR1Q8IWV7 1749 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 SLU7O95391 586 aaKnown RBP10.28□□□□□ -0.76
SEC24A-202ENST00000398844 FANCBQ8NB91 859 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 PEAK1Q9H792 1746 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 AKR1B15C9JRZ8 316 aaPredicted RBP10.28□□□□□ -0.76
SEC24A-202ENST00000398844 USP17L8P0C7I0 530 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 CDC25AP30304 524 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 GTF2IP78347 998 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 PDE4DQ08499 809 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 MAEAQ7L5Y9 396 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 MYRIPQ8NFW9 859 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
SEC24A-202ENST00000398844 RILPL1Q5EBL4 403 aa10.27□□□□□ -0.76
SEC24A-202ENST00000398844 FEZ1Q99689 392 aa10.27□□□□□ -0.76
SEC24A-202ENST00000398844 RAB34Q9BZG1 259 aa10.27□□□□□ -0.76
SEC24A-202ENST00000398844 SORBS3O60504 671 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 PLEKHA8P1O95397 391 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 CDC27P30260 824 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 APOA5Q6Q788 366 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 CCDC94Q9BW85 323 aaPredicted RBP10.27□□□□□ -0.77
SEC24A-202ENST00000398844 ZMYND15Q9H091 742 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 NFE2L3Q9Y4A8 694 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 TMEM110-MUSTN1A8MSY1 372 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 DDX39AO00148 427 aaKnown RBP10.27□□□□□ -0.77
SEC24A-202ENST00000398844 TECP42680 631 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 ATL3Q6DD88 541 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 CTAGE1Q96RT6 745 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 BCL2L12Q9HB09 334 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 MEGF6O75095 1541 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 FMNL1O95466 1100 aaPredicted RBP10.27□□□□□ -0.77
SEC24A-202ENST00000398844 CCDC175P0C221 793 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 RNASE9P60153 205 aaKnown RBP10.27□□□□□ -0.77
SEC24A-202ENST00000398844 ZC3H12CQ9C0D7 883 aaKnown RBP10.27□□□□□ -0.77
SEC24A-202ENST00000398844 PCDHB6Q9Y5E3 794 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 NOP2P46087 812 aaKnown RBP10.27□□□□□ -0.77
SEC24A-202ENST00000398844 SNAP25P60880 206 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 RPS8P62241 208 aaKnown RBP10.27□□□□□ -0.77
SEC24A-202ENST00000398844 MCM6Q14566 821 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 INF2Q27J81 1249 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 TAF4BQ92750 862 aa10.27□□□□□ -0.77
SEC24A-202ENST00000398844 PXDNLA1KZ92 1463 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 TMCO5BA8MYB1 307 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 BTDP43251 543 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 KIF23Q02241 960 aaPredicted RBP10.26□□□□□ -0.77
SEC24A-202ENST00000398844 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
SEC24A-202ENST00000398844 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
SEC24A-202ENST00000398844 SENP2Q9HC62 589 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 TBC1D9BQ66K14 1250 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 DPP8Q6V1X1 898 aaPredicted RBP10.26□□□□□ -0.77
SEC24A-202ENST00000398844 SYCP3Q8IZU3 236 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 SMARCC2Q8TAQ2 1214 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 CCDC174Q6PII3 467 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 OXER1Q8TDS5 423 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 CARD6Q9BX69 1037 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 ZNF500O60304 480 aaPredicted RBP10.26□□□□□ -0.77
SEC24A-202ENST00000398844 PPP2R3AQ06190 1150 aa10.26□□□□□ -0.77
SEC24A-202ENST00000398844 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
SEC24A-202ENST00000398844 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
SEC24A-202ENST00000398844 EIF3JO75822 258 aaKnown RBP10.25□□□□□ -0.77
SEC24A-202ENST00000398844 DDIT3P35638 169 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms