RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 DTHD1Q6ZMT9 781 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 CEP83Q9Y592 693 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
PCDHA11-201ENST00000398640 AK2P54819 239 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 RAPGEF1Q13905 1077 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 NSMFQ6X4W1 530 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 ATG3Q9NT62 314 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 RNF181Q9P0P0 153 aa16■□□□□ 0.15
PCDHA11-201ENST00000398640 ZNF174Q15697 407 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 DTNBO60941 627 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 NEK11Q8NG66 645 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 RAB3IL1Q8TBN0 382 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 E9PCH4 1651 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 M0QZ92 97 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 RRP9O43818 475 aaKnown RBP15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 FNBP1Q96RU3 617 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 GREM2Q9H772 168 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 NARFQ9UHQ1 456 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 LAMC1P11047 1609 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 CTAGE15A4D2H0 777 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 RAD17O75943 681 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 CTAGE8P0CG41 777 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 CCDC186Q7Z3E2 898 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 CTAGE6Q86UF2 777 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 CTAGE4Q8IX94 777 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 APPBP2Q92624 585 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 NACA2Q9H009 215 aa15.99■□□□□ 0.15
PCDHA11-201ENST00000398640 UVSSAQ2YD98 709 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 V9GYY5 206 aaPredicted RBP15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 TACC1O75410 805 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 PRDM1O75626 825 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 RAD50Q92878 1312 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 CYP27B1O15528 508 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 C6orf163Q5TEZ5 329 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 CLEC4GQ6UXB4 293 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 VWA3AA6NCI4 1184 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 KIFC2Q96AC6 838 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 B4E1Z4 1266 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 GRIN3BO60391 1043 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 RLBP1P12271 317 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 SPAG1Q07617 926 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 GRAPQ13588 217 aa15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 KARSQ15046 597 aaKnown RBP15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
PCDHA11-201ENST00000398640 COL15A1P39059 1388 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 ZAP70P43403 619 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 KCNQ2O43526 872 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 CCNT1O60563 726 aaKnown RBP15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 KRT9P35527 623 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 BARGINQ6ZT62 677 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 FBF1Q8TES7 1133 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 DDX23Q9BUQ8 820 aaKnown RBP15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 SPC25Q9HBM1 224 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 BIRC2Q13490 618 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 AZI2Q9H6S1 392 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 MSANTD4Q8NCY6 345 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 SELENOSQ9BQE4 189 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 GUCA1BQ9UMX6 200 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
PCDHA11-201ENST00000398640 BICDL2A1A5D9 508 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 PRPHP41219 470 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 BCAMP50895 628 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 CCDC114Q96M63 670 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 CCDC42Q96M95 316 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 CLRN2A0PK11 232 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 CSPG5O95196 566 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 SLC1A4P43007 532 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 STRN3Q13033 797 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 DDX12PQ92771 950 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 KIDINS220Q9ULH0 1771 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 BTDP43251 543 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 NCAPH2Q6IBW4 605 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 CCDC25Q86WR0 208 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 CARMIL3Q8ND23 1372 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 SPATA31A5Q5VU36 1347 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 SPATA31A7Q8IWB4 1347 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 ZNF532Q9HCE3 1301 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 FAM170AA1A519 330 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 MYCP01106 439 aaPredicted RBP15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 MCM6Q14566 821 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 RNF169Q8NCN4 708 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 LZTFL1Q9NQ48 299 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
PCDHA11-201ENST00000398640 KIF5AQ12840 1032 aa15.96■□□□□ 0.14
PCDHA11-201ENST00000398640 PPP1R9BQ96SB3 815 aa15.96■□□□□ 0.14
PCDHA11-201ENST00000398640 ATP6V0A2Q9Y487 856 aa15.96■□□□□ 0.14
PCDHA11-201ENST00000398640 SH3BP5O60239 455 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 RUFY3Q7L099 469 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 ARHGEF1Q92888 912 aaKnown RBP15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 NAP1L4Q99733 375 aaKnown RBP15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 MAK16Q9BXY0 300 aaKnown RBP15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 GPAA1O43292 621 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 PSMC4P43686 418 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 RASA3Q14644 834 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 LMBR1Q8WVP7 490 aa15.95■□□□□ 0.14
PCDHA11-201ENST00000398640 IFT74Q96LB3 600 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms