RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 FGAP02671 866 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 PPATQ06203 517 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 PPIL2Q13356 520 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 C16orf86Q6ZW13 317 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 BRI3BPQ8WY22 251 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 DDRGK1Q96HY6 314 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 NAPBQ9H115 298 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
MBD1-207ENST00000398488 IGF2BP3O00425 579 aaKnown RBP eCLIP18.84■□□□□ 0.61
MBD1-207ENST00000398488 TM4SF4P48230 202 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 DGKZQ13574 1117 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 MOGSQ13724 837 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 ALX1Q15699 326 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
MBD1-207ENST00000398488 PICK1Q9NRD5 415 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 ZBTB21Q9ULJ3 1066 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 LAMB1P07942 1786 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 HSPA1AP0DMV8 641 aaKnown RBP18.84■□□□□ 0.61
MBD1-207ENST00000398488 HSPA1BP0DMV9 641 aaKnown RBP18.84■□□□□ 0.61
MBD1-207ENST00000398488 AKR1B1P15121 316 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 CTDSPL2Q05D32 466 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 NKX2-3Q8TAU0 364 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 NACAP1Q9BZK3 213 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 NBPF3Q9H094 633 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 KCNH4Q9UQ05 1017 aa18.84■□□□□ 0.61
MBD1-207ENST00000398488 ROBO3Q96MS0 1386 aa18.83■□□□□ 0.61
MBD1-207ENST00000398488 TESPA1A2RU30 521 aaPredicted RBP18.83■□□□□ 0.6
MBD1-207ENST00000398488 PRDM1O75626 825 aa18.83■□□□□ 0.6
MBD1-207ENST00000398488 PTH1RQ03431 593 aa18.83■□□□□ 0.6
MBD1-207ENST00000398488 PPARAQ07869 468 aa18.83■□□□□ 0.6
MBD1-207ENST00000398488 TSKSQ9UJT2 592 aa18.83■□□□□ 0.6
MBD1-207ENST00000398488 MANSC4A6NHS7 340 aaPredicted RBP18.82■□□□□ 0.6
MBD1-207ENST00000398488 SGSM2O43147 1006 aa18.82■□□□□ 0.6
MBD1-207ENST00000398488 ABCB5Q2M3G0 1257 aa18.82■□□□□ 0.6
MBD1-207ENST00000398488 CLEC10AQ8IUN9 316 aa18.82■□□□□ 0.6
MBD1-207ENST00000398488 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.82■□□□□ 0.6
MBD1-207ENST00000398488 R3HDMLQ9H3Y0 253 aa18.82■□□□□ 0.6
MBD1-207ENST00000398488 RNF186Q9NXI6 227 aa18.82■□□□□ 0.6
MBD1-207ENST00000398488 SWAP70Q9UH65 585 aa18.82■□□□□ 0.6
MBD1-207ENST00000398488 CCL15-CCL14A0A0B4J2E2 113 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 TRIM75PA6NK02 468 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 USP17L5A8MUK1 530 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 FOXN1O15353 648 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 RASA1P20936 1047 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 HAND2P61296 217 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 MAP2K1Q02750 393 aaPredicted RBP18.81■□□□□ 0.6
MBD1-207ENST00000398488 SPP2Q13103 211 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 SEPT2Q15019 361 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 CCL15Q16663 113 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 IFNL1Q8IU54 200 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 AMOTL1Q8IY63 956 aa18.81■□□□□ 0.6
MBD1-207ENST00000398488 ASNSP08243 561 aa18.8■□□□□ 0.6
MBD1-207ENST00000398488 GTF2A2P52657 109 aa18.8■□□□□ 0.6
MBD1-207ENST00000398488 SIAH1Q8IUQ4 282 aa18.8■□□□□ 0.6
MBD1-207ENST00000398488 FAM43AQ8N2R8 423 aa18.8■□□□□ 0.6
MBD1-207ENST00000398488 ACER1Q8TDN7 264 aa18.8■□□□□ 0.6
MBD1-207ENST00000398488 CXCL11O14625 94 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 TRPA1O75762 1119 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 SNAPC2Q13487 334 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 GPAT2Q6NUI2 795 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 ANAPC4Q9UJX5 808 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.79■□□□□ 0.6
MBD1-207ENST00000398488 RAD50Q92878 1312 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 PTPRFP10586 1907 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 A0A0G2JLL6 359 aaPredicted RBP18.79■□□□□ 0.6
MBD1-207ENST00000398488 BTBD19C9JJ37 291 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
MBD1-207ENST00000398488 MFAP1P55081 439 aaKnown RBP18.79■□□□□ 0.6
MBD1-207ENST00000398488 SREBF2Q12772 1141 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 PRRT2Q7Z6L0 340 aaPredicted RBP18.79■□□□□ 0.6
MBD1-207ENST00000398488 TBC1D10CQ8IV04 446 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 ZNF280CQ8ND82 737 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 ESYT1Q9BSJ8 1104 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 WDR18Q9BV38 432 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 DSCC1Q9BVC3 393 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 ZMYM6O95789 1325 aa18.79■□□□□ 0.6
MBD1-207ENST00000398488 MYH8P13535 1937 aa18.78■□□□□ 0.6
MBD1-207ENST00000398488 A0A1W2PRG0 241 aa18.78■□□□□ 0.6
MBD1-207ENST00000398488 CETPP11597 493 aa18.78■□□□□ 0.6
MBD1-207ENST00000398488 RUFY2Q8WXA3 655 aa18.78■□□□□ 0.6
MBD1-207ENST00000398488 TBC1D8O95759 1140 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 INHBEP58166 350 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 MTMR2Q13614 643 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 FAM47AQ5JRC9 791 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 MKNK2Q9HBH9 465 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 CABP5Q9NP86 173 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 GINM1Q9NU53 330 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 TAF6LQ9Y6J9 622 aa18.77■□□□□ 0.6
MBD1-207ENST00000398488 HSPA8P11142 646 aaKnown RBP18.76■□□□□ 0.59
MBD1-207ENST00000398488 HMGCS2P54868 508 aa18.76■□□□□ 0.59
MBD1-207ENST00000398488 TREML2Q5T2D2 321 aa18.76■□□□□ 0.59
MBD1-207ENST00000398488 REM2Q8IYK8 340 aaPredicted RBP18.76■□□□□ 0.59
MBD1-207ENST00000398488 GREB1LQ9C091 1923 aaPredicted RBP18.76■□□□□ 0.59
MBD1-207ENST00000398488 LSG1Q9H089 658 aaKnown RBP18.76■□□□□ 0.59
MBD1-207ENST00000398488 TAOK2Q9UL54 1235 aa18.76■□□□□ 0.59
MBD1-207ENST00000398488 CDC45O75419 566 aa18.75■□□□□ 0.59
MBD1-207ENST00000398488 FGRP09769 529 aa18.75■□□□□ 0.59
MBD1-207ENST00000398488 BACE1P56817 501 aa18.75■□□□□ 0.59
MBD1-207ENST00000398488 KIAA1755Q5JYT7 1200 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms