RNA–Protein interactions for RNA: ENST00000397898.7

SUMO3-203, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 3 BASIC

Gene SUMO3, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-203ENST00000397898 FAM47AQ5JRC9 791 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 ZSWIM6Q9HCJ5 1215 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 ZSWIM5Q9P217 1185 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 TSPY2A6NKD2 308 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 PHF20L1A8MW92 1017 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 PPP1R12BO60237 982 aaPredicted RBP17.94■□□□□ 0.46
SUMO3-203ENST00000397898 HMGB1P09429 215 aaKnown RBP17.94■□□□□ 0.46
SUMO3-203ENST00000397898 TSPY3P0CV98 308 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 TSPY8P0CW00 308 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 NT5C2P49902 561 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 TFAP4Q01664 338 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 BLOC1S2Q6QNY1 142 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 CCDC17Q96LX7 622 aa17.94■□□□□ 0.46
SUMO3-203ENST00000397898 UPF3BQ9BZI7 483 aaKnown RBP17.94■□□□□ 0.46
SUMO3-203ENST00000397898 USP2O75604 605 aaPredicted RBP17.93■□□□□ 0.46
SUMO3-203ENST00000397898 TOMM70O94826 608 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 GDF11O95390 407 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 CPA1P15085 419 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 AKR1B1P15121 316 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 DHX32Q7L7V1 743 aaKnown RBP17.93■□□□□ 0.46
SUMO3-203ENST00000397898 SMC1BQ8NDV3 1235 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 KLRG1Q96E93 195 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 IPO9Q96P70 1041 aaKnown RBP17.93■□□□□ 0.46
SUMO3-203ENST00000397898 ZNF408Q9H9D4 720 aa17.93■□□□□ 0.46
SUMO3-203ENST00000397898 MCM5P33992 734 aa17.92■□□□□ 0.46
SUMO3-203ENST00000397898 RUFY3Q7L099 469 aa17.92■□□□□ 0.46
SUMO3-203ENST00000397898 CHST3Q7LGC8 479 aa17.92■□□□□ 0.46
SUMO3-203ENST00000397898 WRNIP1Q96S55 665 aa17.92■□□□□ 0.46
SUMO3-203ENST00000397898 ZNF112Q9UJU3 913 aa17.92■□□□□ 0.46
SUMO3-203ENST00000397898 CYP46A1Q9Y6A2 500 aa17.92■□□□□ 0.46
SUMO3-203ENST00000397898 MPHOSPH10O00566 681 aaKnown RBP17.91■□□□□ 0.46
SUMO3-203ENST00000397898 RPS6KB1P23443 525 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 CAP2P40123 477 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 ANTXR2P58335 489 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 EXOSC10Q01780 885 aaKnown RBP17.91■□□□□ 0.46
SUMO3-203ENST00000397898 ABCB5Q2M3G0 1257 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 SHROOM1Q2M3G4 852 aaPredicted RBP17.91■□□□□ 0.46
SUMO3-203ENST00000397898 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
SUMO3-203ENST00000397898 MYH8P13535 1937 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 PRC1O43663 620 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 INPP5BP32019 993 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 JAG1P78504 1218 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 RABEP1Q15276 862 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 NEDD1Q8NHV4 660 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 ZKSCAN3Q9BRR0 538 aa17.91■□□□□ 0.46
SUMO3-203ENST00000397898 ANGEL1Q9UNK9 670 aaKnown RBP17.91■□□□□ 0.46
SUMO3-203ENST00000397898 CTNND1O60716 968 aaKnown RBP17.9■□□□□ 0.46
SUMO3-203ENST00000397898 CELF2O95319 508 aaKnown RBP17.9■□□□□ 0.46
SUMO3-203ENST00000397898 GH2P01242 217 aa17.9■□□□□ 0.46
SUMO3-203ENST00000397898 TTLL12Q14166 644 aaPredicted RBP17.9■□□□□ 0.46
SUMO3-203ENST00000397898 IQCA1Q86XH1 822 aa17.9■□□□□ 0.46
SUMO3-203ENST00000397898 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.9■□□□□ 0.462e-21■■■■■ 37.2
SUMO3-203ENST00000397898 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.9■□□□□ 0.46
SUMO3-203ENST00000397898 CABP5Q9NP86 173 aa17.9■□□□□ 0.46
SUMO3-203ENST00000397898 PLIN4Q96Q06 1357 aa17.9■□□□□ 0.46
SUMO3-203ENST00000397898 WDR19Q8NEZ3 1342 aa17.9■□□□□ 0.46
SUMO3-203ENST00000397898 NMT2O60551 498 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 IREB2P48200 963 aaKnown RBP17.89■□□□□ 0.45
SUMO3-203ENST00000397898 NEK4P51957 841 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 MAP3K11Q16584 847 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 TMEM179Q6ZVK1 233 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 MOB2Q70IA6 237 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
SUMO3-203ENST00000397898 UBAC1Q9BSL1 405 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 LRRC2Q9BYS8 371 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 IL17RBQ9NRM6 502 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 TCP11L1Q9NUJ3 509 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 PASKQ96RG2 1323 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 MAP3K9P80192 1104 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 ARMC9Q7Z3E5 817 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 ZSCAN10Q96SZ4 725 aaPredicted RBP17.89■□□□□ 0.45
SUMO3-203ENST00000397898 ZBTB21Q9ULJ3 1066 aa17.89■□□□□ 0.45
SUMO3-203ENST00000397898 IGKV6D-41A0A0C4DH26 115 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 ASNSP08243 561 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 GUCY1A2P33402 732 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 SART3Q15020 963 aaKnown RBP17.88■□□□□ 0.45
SUMO3-203ENST00000397898 RAB3GAP1Q15042 981 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 CST9Q5W186 159 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 SCYL3Q8IZE3 742 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 CEP95Q96GE4 821 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 GBA2Q9HCG7 927 aaPredicted RBP17.88■□□□□ 0.45
SUMO3-203ENST00000397898 PDRG1Q9NUG6 133 aa17.88■□□□□ 0.45
SUMO3-203ENST00000397898 TNKSO95271 1327 aa17.87■□□□□ 0.45
SUMO3-203ENST00000397898 IFIT3O14879 490 aaKnown RBP17.87■□□□□ 0.45
SUMO3-203ENST00000397898 FKBP1BP68106 108 aa17.87■□□□□ 0.45
SUMO3-203ENST00000397898 SEPT2Q15019 361 aa17.87■□□□□ 0.45
SUMO3-203ENST00000397898 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.87■□□□□ 0.45
SUMO3-203ENST00000397898 Q6ZUG5 572 aa17.87■□□□□ 0.45
SUMO3-203ENST00000397898 IGDCC4Q8TDY8 1250 aa17.87■□□□□ 0.45
SUMO3-203ENST00000397898 TMEM87BQ96K49 555 aa17.87■□□□□ 0.45
SUMO3-203ENST00000397898 MTA3Q9BTC8 594 aa17.87■□□□□ 0.45
SUMO3-203ENST00000397898 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.87■□□□□ 0.45
SUMO3-203ENST00000397898 ERICH2A1L162 156 aa17.86■□□□□ 0.45
SUMO3-203ENST00000397898 FSTL1Q12841 308 aa17.86■□□□□ 0.45
SUMO3-203ENST00000397898 VGLL4Q14135 290 aa17.86■□□□□ 0.45
SUMO3-203ENST00000397898 CCDC178Q5BJE1 867 aa17.86■□□□□ 0.45
SUMO3-203ENST00000397898 TMEM67Q5HYA8 995 aa17.86■□□□□ 0.45
SUMO3-203ENST00000397898 NOL9Q5SY16 702 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms