RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 NEK1Q96PY6 1258 aa23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 FZD1Q9UP38 647 aa23.02■■□□□ 1.28
MAP1LC3A-203ENST00000397709 OTOFQ9HC10 1997 aa23.01■■□□□ 1.27
MAP1LC3A-203ENST00000397709 AKR1B1P15121 316 aa23.01■■□□□ 1.27
MAP1LC3A-203ENST00000397709 MAP3K11Q16584 847 aa23.01■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ESR2Q92731 530 aa23.01■■□□□ 1.27
MAP1LC3A-203ENST00000397709 KIF2CQ99661 725 aa23.01■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TM6SF1Q9BZW5 370 aa23.01■■□□□ 1.27
MAP1LC3A-203ENST00000397709 PLIN4Q96Q06 1357 aa23.01■■□□□ 1.27
MAP1LC3A-203ENST00000397709 RANBP6O60518 1105 aaKnown RBP23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 KDM4AO75164 1064 aa23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 CELF2O95319 508 aaKnown RBP23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 PSMA5P28066 241 aa23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 FSTL1Q12841 308 aa23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 PRKG1Q13976 671 aa23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 COL9A3Q14050 684 aaPredicted RBP23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 WRNIP1Q96S55 665 aa23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ZNF408Q9H9D4 720 aa23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ATAD5Q96QE3 1844 aa23■■□□□ 1.27
MAP1LC3A-203ENST00000397709 DOCK1Q14185 1865 aa22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 GDF11O95390 407 aa22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 CAP2P40123 477 aa22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 IREB2P48200 963 aaKnown RBP22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 FKBP1BP68106 108 aa22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TFAP4Q01664 338 aa22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 FAM47AQ5JRC9 791 aa22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 CYB5R4Q7L1T6 521 aa22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ANGEL1Q9UNK9 670 aaKnown RBP22.99■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TSPY2A6NKD2 308 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 CTNND1O60716 968 aaKnown RBP22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 HMGB1P09429 215 aaKnown RBP22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 INPP5BP32019 993 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 JAG1P78504 1218 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ABCB5Q2M3G0 1257 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 SHROOM1Q2M3G4 852 aaPredicted RBP22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ARMC9Q7Z3E5 817 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 NEDD1Q8NHV4 660 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 GBA2Q9HCG7 927 aaPredicted RBP22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ZSWIM6Q9HCJ5 1215 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ZSWIM5Q9P217 1185 aa22.98■■□□□ 1.27
MAP1LC3A-203ENST00000397709 IGKV6D-41A0A0C4DH26 115 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TSPY3P0CV98 308 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TSPY8P0CW00 308 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 CASTP20810 708 aaKnown RBP22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ANTXR2P58335 489 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 MAP3K9P80192 1104 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TTLL12Q14166 644 aaPredicted RBP22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 NOL9Q5SY16 702 aaKnown RBP22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 CST9Q5W186 159 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 BLOC1S2Q6QNY1 142 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 MOB2Q70IA6 237 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 GINM1Q9NU53 330 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 ZBTB21Q9ULJ3 1066 aa22.97■■□□□ 1.27
MAP1LC3A-203ENST00000397709 MPHOSPH10O00566 681 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 GH2P01242 217 aa22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 GUCY1A2P33402 732 aa22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 MCM5P33992 734 aa22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 EXOSC10Q01780 885 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TMEM179Q6ZVK1 233 aa22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 DHX32Q7L7V1 743 aaKnown RBP22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 SCYL3Q8IZE3 742 aa22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 TCP11L1Q9NUJ3 509 aa22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 WDR19Q8NEZ3 1342 aa22.96■■□□□ 1.27
MAP1LC3A-203ENST00000397709 CPA1P15085 419 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 RPS6KB1P23443 525 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 LDLRAD1Q5T700 205 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 RUFY3Q7L099 469 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 C2orf69Q8N8R5 385 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ZKSCAN4Q969J2 545 aaPredicted RBP22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CABP5Q9NP86 173 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 IL17RBQ9NRM6 502 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CYP46A1Q9Y6A2 500 aa22.95■■□□□ 1.26
MAP1LC3A-203ENST00000397709 UNCXA6NJT0 531 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 PRC1O43663 620 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ASNSP08243 561 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 VGLL4Q14135 290 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CHST3Q7LGC8 479 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ANKRD13AQ8IZ07 590 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 MTA3Q9BTC8 594 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 UPF3BQ9BZI7 483 aaKnown RBP22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 SNCAIPQ9Y6H5 919 aa22.94■■□□□ 1.26
MAP1LC3A-203ENST00000397709 UBE2Q2LH0YL09 131 aa22.93■■□□□ 1.26
MAP1LC3A-203ENST00000397709 NOVP48745 357 aa22.93■■□□□ 1.26
MAP1LC3A-203ENST00000397709 SEPT2Q15019 361 aa22.93■■□□□ 1.26
MAP1LC3A-203ENST00000397709 RABEP1Q15276 862 aa22.93■■□□□ 1.26
MAP1LC3A-203ENST00000397709 IQCA1Q86XH1 822 aa22.93■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ZSCAN10Q96SZ4 725 aaPredicted RBP22.93■■□□□ 1.26
MAP1LC3A-203ENST00000397709 NMT2O60551 498 aa22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CCDC178Q5BJE1 867 aa22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CEP95Q96GE4 821 aa22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 TCEANC2Q96MN5 208 aa22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 ZKSCAN3Q9BRR0 538 aa22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 UBAC1Q9BSL1 405 aa22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 KANSL2Q9H9L4 492 aa22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.92■■□□□ 1.26
MAP1LC3A-203ENST00000397709 CSADQ9Y600 493 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms