RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 KMT5BQ4FZB7 885 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ESCO1Q5FWF5 840 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SYDE2Q5VT97 1194 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 TSHZ3Q63HK5 1081 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 FAM196AQ6ZSG2 479 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ZBTB38Q8NAP3 1195 aaPredicted RBP8.13□□□□□ -1.11
SMCO1-201ENST00000397537 TTC16Q8NEE8 873 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ANKRD24Q8TF21 1146 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 FERD3LQ96RJ6 166 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SLC26A8Q96RN1 970 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SEZ6LQ9BYH1 1024 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 PUS7LQ9H0K6 701 aaKnown RBP8.13□□□□□ -1.11
SMCO1-201ENST00000397537 KLHL11Q9NVR0 708 aa8.13□□□□□ -1.11
SMCO1-201ENST00000397537 SEPT9Q9UHD8 586 aaPredicted RBP8.13□□□□□ -1.11
SMCO1-201ENST00000397537 DDX20Q9UHI6 824 aaKnown RBP8.13□□□□□ -1.11
SMCO1-201ENST00000397537 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
SMCO1-201ENST00000397537 POLR3DP05423 398 aaPredicted RBP8.12□□□□□ -1.11
SMCO1-201ENST00000397537 L1CAMP32004 1257 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 CCNFP41002 786 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 TUBB8Q3ZCM7 444 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 MINDY4Q4G0A6 757 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 SH3PXD2AQ5TCZ1 1133 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 FOXB2Q5VYV0 432 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 LSRQ86X29 649 aaPredicted RBP8.12□□□□□ -1.11
SMCO1-201ENST00000397537 TREML1Q86YW5 311 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 OR6P1Q8NGX9 317 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 FBXO27Q8NI29 283 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 ZNF622Q969S3 477 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMCO1-201ENST00000397537 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 TMEM87BQ96K49 555 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 NLRC4Q9NPP4 1024 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 ZBTB21Q9ULJ3 1066 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 LUC7L2Q9Y383 392 aaKnown RBP8.12□□□□□ -1.11
SMCO1-201ENST00000397537 USP3Q9Y6I4 520 aa8.12□□□□□ -1.11
SMCO1-201ENST00000397537 GADD45BO75293 160 aaPredicted RBP8.11□□□□□ -1.11
SMCO1-201ENST00000397537 FBXO24O75426 580 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 RXRGP48443 463 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 HDGFP51858 240 aaKnown RBP8.11□□□□□ -1.11
SMCO1-201ENST00000397537 GJA9P57773 515 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 C1orf122Q6ZSJ8 110 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 SAMD7Q7Z3H4 446 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 FAM178BQ8IXR5 827 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 OR8H2Q8N162 312 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 IL17REQ8NFR9 667 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 SLC7A3Q8WY07 619 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 SH3BP1Q9Y3L3 701 aa8.11□□□□□ -1.11
SMCO1-201ENST00000397537 PSDA5PKW4 1024 aaPredicted RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 CLK1P49759 484 aaKnown RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 RAB15P59190 212 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 EPM2AIP1Q7L775 607 aaPredicted RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 SRLQ86TD4 932 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 PNMA8AQ86V59 439 aaPredicted RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 GLIS3Q8NEA6 775 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 MYCBPQ99417 103 aaPredicted RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 OSBPL5Q9H0X9 879 aaPredicted RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 OSBPL3Q9H4L5 887 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 ANLNQ9NQW6 1124 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 DDX21Q9NR30 783 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 ACAD8Q9UKU7 415 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 SPEF1Q9Y4P9 236 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 CARMIL2Q6F5E8 1435 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 PLD2O14939 933 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 TLR3O15455 904 aaKnown RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 RLBP1P12271 317 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 LIG3P49916 1009 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 LMNB2Q03252 620 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 PDE1CQ14123 709 aaPredicted RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 FNDC3BQ53EP0 1204 aaKnown RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 KIAA0319Q5VV43 1072 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 MSL1Q68DK7 614 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 MZT2BQ6NZ67 158 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 SPATS2Q86XZ4 545 aaKnown RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 SNX29Q8TEQ0 813 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 POF1BQ8WVV4 589 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 GOLGA1Q92805 767 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 KISS1RQ969F8 398 aaPredicted RBP8.1□□□□□ -1.11
SMCO1-201ENST00000397537 EXOC2Q96KP1 924 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 UNC93B1Q9H1C4 597 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 SUV39H2Q9H5I1 410 aa8.1□□□□□ -1.11
SMCO1-201ENST00000397537 C9IYK1 514 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 F5H423 210 aaPredicted RBP8.09□□□□□ -1.11
SMCO1-201ENST00000397537 RNF40O75150 1001 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 FBXO21O94952 628 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 SETSIPP0DME0 302 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 MCM4P33991 863 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 TSPAN7P41732 249 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 MTFR1Q15390 333 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 LDHAL6AQ6ZMR3 332 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 RSRC2Q7L4I2 434 aaKnown RBP8.09□□□□□ -1.11
SMCO1-201ENST00000397537 OTOP3Q7RTS5 596 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 ALDH16A1Q8IZ83 802 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 DDX1Q92499 740 aaKnown RBP8.09□□□□□ -1.11
SMCO1-201ENST00000397537 PAWRQ96IZ0 340 aaKnown RBP8.09□□□□□ -1.11
SMCO1-201ENST00000397537 CDK5RAP3Q96JB5 506 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 DHRS4Q9BTZ2 278 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 FNIP2Q9P278 1114 aa8.09□□□□□ -1.11
SMCO1-201ENST00000397537 RGS17Q9UGC6 210 aaPredicted RBP8.09□□□□□ -1.11
SMCO1-201ENST00000397537 FRMPD2Q68DX3 1309 aaPredicted RBP8.09□□□□□ -1.11
SMCO1-201ENST00000397537 DXOO77932 396 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms