RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ALS2Q96Q42 1657 aa5.73□□□□□ -1.49
SSR1-202ENST00000397511 CTAGE5O15320 804 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 ZFYP08048 801 aaPredicted RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 EVX2Q03828 476 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 NBPF20Q3BBV1 942 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 CC2D1AQ6P1N0 951 aaPredicted RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 SHC4Q6S5L8 630 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 IFNL3Q8IZI9 196 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 LCORLQ8N3X6 602 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 KCNG4Q8TDN1 519 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 STAMQ92783 540 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 FAM107BQ9H098 131 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 EPB41L4AQ9HCS5 686 aaPredicted RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 RBM28Q9NW13 759 aaKnown RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 RAI14Q9P0K7 980 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 TACC3Q9Y6A5 838 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 PCNTO95613 3336 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 PSDA5PKW4 1024 aaPredicted RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 TMEM232C9JQI7 657 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 CCP110O43303 1012 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 SASH3O75995 380 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 CSF1RP07333 972 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 LRCH2Q5VUJ6 765 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 ARMCX5Q6P1M9 558 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 USP49Q70CQ1 688 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 SPATA5Q8NB90 893 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 CNNM3Q8NE01 707 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 PPP1R13BQ96KQ4 1090 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 SLC4A4Q9Y6R1 1079 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 COL5A2P05997 1499 aaPredicted RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 FAM205CA6NFA0 338 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 TADA3O75528 432 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 SFPQP23246 707 aaKnown RBP eCLIP5.72□□□□□ -1.49
SSR1-202ENST00000397511 DHX8Q14562 1220 aaKnown RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 SUSD4Q5VX71 490 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 KLHL10Q6JEL2 608 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 GPR161Q8N6U8 529 aaKnown RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 OXER1Q8TDS5 423 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 STRBPQ96SI9 672 aaKnown RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 UTP14AQ9BVJ6 771 aaKnown RBP5.72□□□□□ -1.49
SSR1-202ENST00000397511 POLR3EQ9NVU0 708 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 FANCLQ9NW38 375 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 NWD2Q9ULI1 1742 aa5.72□□□□□ -1.49
SSR1-202ENST00000397511 PHLPP2Q6ZVD8 1323 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 STRCP1A6NGW2 1772 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 COL18A1P39060 1754 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 A0A087WUV0 522 aaPredicted RBP5.71□□□□□ -1.49
SSR1-202ENST00000397511 SH2B2O14492 632 aaPredicted RBP5.71□□□□□ -1.49
SSR1-202ENST00000397511 POLR2DO15514 142 aaKnown RBP5.71□□□□□ -1.49
SSR1-202ENST00000397511 CYP19A1P11511 503 aaPredicted RBP5.71□□□□□ -1.49
SSR1-202ENST00000397511 GYG1P46976 350 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 UBASH3AP57075 661 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 EVCP57679 992 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 DNAJC21Q5F1R6 531 aaKnown RBP5.71□□□□□ -1.49
SSR1-202ENST00000397511 JAKMIP3Q5VZ66 844 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 MFSD6Q6ZSS7 791 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 ADGRA1Q86SQ6 560 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 TADA2BQ86TJ2 420 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 FOXP4Q8IVH2 680 aaPredicted RBP5.71□□□□□ -1.49
SSR1-202ENST00000397511 VPS18Q9P253 973 aa5.71□□□□□ -1.49
SSR1-202ENST00000397511 RFX7Q2KHR2 1363 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 RIC1Q4ADV7 1423 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 EXOC5O00471 708 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 PPP1R12AO14974 1030 aaPredicted RBP5.71□□□□□ -1.5
SSR1-202ENST00000397511 AFMP43652 599 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 MNAT1P51948 309 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 STX17P56962 302 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 FANCCQ00597 558 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 PDE4BQ07343 736 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 SLC39A14Q15043 492 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 E4F1Q66K89 784 aaPredicted RBP5.71□□□□□ -1.5
SSR1-202ENST00000397511 CPLX2Q6PUV4 134 aaKnown RBP5.71□□□□□ -1.5
SSR1-202ENST00000397511 DIS3L2Q8IYB7 885 aaKnown RBP5.71□□□□□ -1.5
SSR1-202ENST00000397511 CCDC150Q8NCX0 1101 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 IGDCC4Q8TDY8 1250 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 CPLX3Q8WVH0 158 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 EPC1Q9H2F5 836 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 LY9Q9HBG7 655 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 CABP5Q9NP86 173 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 PCDHB6Q9Y5E3 794 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 ADAMTS7Q9UKP4 1686 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 KCPQ6ZWJ8 1503 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 ZMYM6O95789 1325 aa5.71□□□□□ -1.5
SSR1-202ENST00000397511 NUTM2BA6NNL0 878 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 NUTM2EB1AL46 878 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 PDE8AO60658 829 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 EIF3JO75822 258 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 URI1O94763 535 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 KCNJ6P48051 423 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 ADKP55263 362 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 ETF1P62495 437 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 SETQ01105 290 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 SSRP1Q08945 709 aaKnown RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 MAP3K12Q12852 859 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 NCAPHQ15003 741 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 BRAPQ7Z569 592 aa5.7□□□□□ -1.5
SSR1-202ENST00000397511 NUTM2AQ8IVF1 878 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 SMYD4Q8IYR2 804 aaPredicted RBP5.7□□□□□ -1.5
SSR1-202ENST00000397511 MICALL1Q8N3F8 863 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms